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Table 1 Efficiency of target enrichment

From: Enrichment of sequencing targets from the human genome by solution hybridization

Sample Replicate Filtered reads1 (Mb) Mapped bases, Mb Uniquely mapped vases, Mb
    HG18 On target On or near target2 LINE SINE HG18 On target On or near target2
NA15510 Capture 1 8,232,578 (296.4) 291.2 119.8 147.1 21.4 12.4 256.7 115.1 141.6
NA15510 Capture 2 8,106,056 (291.8) 286.8 107.1 130.9 24.1 13.9 252.8 102.9 126.0
HE00069 Capture 1 7,743,638 (278.8) 274.9 112.7 142.2 19.5 10.3 246.0 108.5 137.3
HE00069 Capture 2 8,451,260 (304.2) 300.3 112.1 140.2 24.9 12.8 268.5 108.0 135.4
  Average 8,133,383 (292.8) 288.3 112.9 140.1 22.4 12.4 256.0 108.6 135.1
  1. 1Number of high-quality reads from Illumina pipeline v1.3 and the megabases they compose.
  2. 2Near is defined as 150 bp upstream or downstream of the target sequence.