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Table 8 EST clusters without KOG assignment predicted to be highly 2N-specific based on statistical comparison of libraries

From: Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell

Cluster ID Number of 2N ESTs P-value Homolog ID Homolog description BLAST
GS00092 6 7 × 10-17 *B1X317_CYAA5 Putative uncharacterized protein 7 × 10-17
GS03351 14 2 × 10-06 *Q0 MYU5_EMIHU Putative arachidonate 15-lipoxygenase second type 2 × 10-06
GS05210 7 1 × 10-25 *C1AEM4_GEMAT Putative glutamine cyclotransferase 1 × 10-25
GS01732 8 1 × 10-19 *A7WPV6_KARMI Putative uncharacterized protein 1 × 10-19
GS02223 7 1 × 10-31 *C1 MGG4_9CHLO Predicted protein 1 × 10-31
GS05779 6 2 × 10-17 *C1E2K5_9CHLO Predicted protein 2 × 10-17
GS06362 6 2 × 10-15 *A9V2G5_MONBE Predicted protein 2 × 10-15
GS00766 7 3 × 10-07 *B7G9 M0_PHATR Predicted protein 3 × 10-07
GS03302 7 1 × 10-32 *B7G0S2_PHATR Predicted protein 1 × 10-32
GS03476 9 2 × 10-09 *B7FQM3_PHATR Predicted protein 2 × 10-09
GS00513 8 6 × 10-08 *Q7V952_PROMM Putative uncharacterized protein 6 × 10-08
GS01720 9 8 × 10-06 *B2ZYD9_9CAUD Nucleoside-diphosphate-sugar pyrophosphorylase-like protein 8 × 10-06
GS05985 7 6 × 10-06 *B0J8I4_RHILT Putative uncharacterized protein 6 × 10-06
GS01421 6 7 × 10-11 *B9S8J5_RICCO Putative uncharacterized protein 7 × 10-11
GS05596 8 2 × 10-11 *B8 MI73_TALSN Putative uncharacterized protein 2 × 10-11
GS00659 6 5 × 10-22 *A4VDD7_TETTH Putative uncharacterized protein 5 × 10-22
GS11002 16 7.6 × 10-6    
GS02507 12 1.2 × 10-4    
GS01164 10 4.9 × 10-4    
GS01802 10 4.9 × 10-4    
  1. Only clusters with zero ESTs originating from the 1N library are shown, and only the orphans confirmed by RT-PCR are included in this table. Homolog IDs are marked as in Table 5. Clusters in bold were chosen for RT-PCR validation (cluster GS11002 is shown in bold italics, the only cluster tested in which abundant RT-PCR product could also be detected from 1N cells). Additional data file 5 gives a complete list of all clusters predicted to be 2N-specific by statistical comparison of libraries.
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Genome Biology

ISSN: 1474-760X

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