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Table 3 Genes and transcripts affected by deletions predicted from aberrantly mapping sequence pairs

From: Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver triglyceride levels

Gene Transcript Strain Exons
1700001C19Rik ENSMUST00000073143 CAST/Ei 1
Alk ENSMUST00000086639 A/J 19
Capn13 ENSMUST00000095208 CAST/Ei 7
EN ENSMUST00000052440 CAST/Ei 1, 2
  ENSMUST00000077420 CAST/Ei 1
  ENSMUST00000079363 CAST/Ei 1
  ENSMUST00000086423 CAST/Ei 1
ENSMUSG00000060087 ENSMUST00000077584 A/J 1, 2
Galnt14 ENSMUST00000024858 CAST/Ei 15
Gfer ENSMUST00000046839 A/J 3
  ENSMUST00000046839 CAST/Ei 3
mmu-mir-692-1 ENSMUST00000102263 A/J 1
  ENSMUST00000102263 CAST/Ei 1
Olfr55 ENSMUST00000112168 CAST/Ei 1
Prss28 ENSMUST00000015267 A/J 1-7
Rpl35a ENSMUST00000087940 A/J 1
  ENSMUST00000087940 CAST/Ei 1
Tbc1d24 ENSMUST00000040474 A/J 9
  ENSMUST00000040474 CAST/Ei 9
  ENSMUST00000097376 CAST/Ei 10
U6 ENSMUST00000102026 A/J 1
V1rf3 ENSMUST00000077301 CAST/Ei 1
Wiz ENSMUST00000087699 A/J 4