Figure 5From: Deep short-read sequencing of chromosome 17 from the mouse strains A/J and CAST/Ei identifies significant germline variation and candidate genes that regulate liver triglyceride levelsAnalysis of SNPs found in CAST/Ei sequence. SNPs were called by the MAQ algorithm and then filtered using the MAQ SNP filter. The overlap between the SNPs called by MAQ using the CAST/Ei Illumina data (MAQ Calls), those present in dbSNP, and those present in the 'Mouse HapMap'.Back to article page