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Table 2 Summary of tag classification into various categories and comparisons

From: Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling

   DETs in various comparisons*
Category Number of DETs E15.5 R versus C Adult L versus Ri E15.5 versus E17.5 E15.5 versus P1.5 P1.5 versus Ad E versus Ad Total
Gene 386 (68.8) 25 (56.8) 10 (58.8) 24 (63.2) 16 (44.4) 114 (59.4) 253 (77.1) 442
EST 33 (5.9) 2 (4.5) 2 (11.8) 1 (2.6) 1 (2.8) 9 (4.7) 24 (7.3) 39
Multiple matches 55 (9.8) 9 (20.5) 3 (17.6) 5 (13.2) 4 (11.1) 21(10.9) 23 (7.0) 65
Ambiguous 44 (7.8) 4 (9.1) 2 (11.8) 6 (15.8) 4 (11.1) 14 (7.3) 20 (6.1) 50
No match 43 (7.7) 4 (9.1) 0 (0) 2 (5.3) 11 (30.6) 34 (17.7) 8 (2.4) 59
Total 561 44 17 38 36 192 328 655
  1. Tag classification into various categories and comparisons was based on the mouse genome assembly released in July 2007. Values in parentheses represent the 'percentage' across a column. *Total number of tags for various comparisons is 655 (rather than 561) due to the same tag being statistically significant in more than one comparison. Differentially expressed tags. Ad: adult stage; C: caudal region; E: embryonic day/stage; L: adult left hemisphere; P: postnatal days; R: rostral region; Ri: adult right hemisphere.