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Table 1 GM results: performances of systems and individual components on the test and training data.

From: Concept recognition for extracting protein interaction relations from biomedical text

 

Test Data

Training Data

Tagger

Precision

Recall

F-measure

Precision

Recall

F-measure

CCP

77.30

77.74

77.52

83.68

83.48

83.58

ABNER

80.38

73.26

76.65

83.85

80.86

82.33

LingPipe

72.53

80.00

76.09

88.47

92.77

90.57

2/3 Majority

85.54 (2)

76.83 (3)

80.95 (3)

91.15

86.33

88.68

Unanimous

92.78 (1)

49.12 (4)

64.24 (4)

94.56

61.41

74.46

Overlap

66.22 (4)

83.72 (2)

73.94 (4)

79.27

91.17

84.80

Median

85.08

79.05

81.32

   
  1. Presented are median scores, as supplied by organizers. Quartiles for our runs are shown in parentheses. GM, gene mention.