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Table 4 Top 15 word and word pair features for IAS task ranked by S and Sabmeasures.

From: Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks

Top 15 words for S

Top 15 pairs for Sab

w

P TP

P TN

S

w i , w j

P TP

P TN

S 10

interact

0.76

0.12

0.64

with, interact

0.56

0.06

0.50

bind

0.63

0.14

0.49

interact, protein

0.23

0.02

0.21

domain

0.52

0.08

0.44

between, interact

0.25

0.12

0.13

complex

0.46

0.15

0.31

two-hybrid, yeast

0.18

0.00

0.17

proteom

0.01

0.29

0.28

associ, with

0.27

0.10

0.16

with

0.9

0.65

0.25

bind, protein

0.19

0.03

0.15

yeast

0.28

0.04

0.24

with, complex

0.16

0.02

0.14

activ

0.55

0.32

0.23

analysi, proteom

0.00

0.12

0.12

two-hybrid

0.23

0.00

0.22

with, protein

0.24

0.13

0.11

protein

0.86

0.64

0.22

bind, domain

0.12

0.02

0.1

between

0.38

0.16

0.22

interact, domain

0.10

0.00

0.1

associ

0.35

0.13

0.22

protein, domain

0.10

0.01

0.09

region

0.26

0.06

0.2

with, domain

0.1

0.01

0.08

function

0.48

0.28

0.2

mass, spectrometri

0.02

0.10

0.08

regul

0.38

0.19

0.19

two-hybrid, screen

0.08

0.00

0.08

  1. IAS, interaction article subtask.
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Genome Biology

ISSN: 1474-760X

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