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Table 2 Pooled performance measures for each category

From: An en masse phenotype and function prediction system for Mus musculus

  P01R* P05R P10R P20R P50R AUC-ROC
BP [3,10] 0.41 0.23 0.17 0.08 0.002 0.75
BP [11,30] 0.41 0.28 0.22 0.14 0.01 0.79
BP [31,100] 0.57 0.51 0.42 0.30 0.06 0.75
BP [101,300] 0.60 0.49 0.43 0.32 0.09 0.85
CC [3,10] 0.78 0.43 0.45 0.24 0.02 0.85
CC [11,30] 0.72 0.54 0.49 0.38 0.04 0.86
CC [31,100] 0.71 0.65 0.51 0.36 0.04 0.86
CC [101,300] 0.92 0.72 0.59 0.46 0.12 0.87
MF [3,10] 0.65 0.52 0.52 0.48 0.25 0.88
MF [11,30] 0.70 0.68 0.62 0.56 0.34 0.90
MF [31,100] 0.84 0.74 0.66 0.60 0.43 0.93
MF [101,300] 0.86 0.70 0.69 0.61 0.47 0.92
Pheno [3,10] 0.10 0.07 0.03 0.003 0.0006 0.70
Pheno [11,30] 0.20 0.13 0.07 0.02 0.003 0.75
Pheno [31,100] 0.31 0.20 0.14 0.07 0.009 0.78
Pheno [101,300] 0.44 0.33 0.25 0.17 0.04 0.78
  1. *P01R is the precision at 1% recall, and the other headers follow this pattern. AUC, area under the curve; BP, biological process; CC, cellular component; MF, molecular function; Pheno, phenotype; ROC, receiver operating characteristic.