Table 2 Mean thresholds and accuracy for pseudo/real exon classification (10-fold cross-validation)

From: Exon creation and establishment in human genes

		Threshold		Accuracy
SRE set	Measure	Mean	SD	Mean	SD
ESEcomb	Exonic density	0.564*	0.000	0.672	0.008
	Intronic density	0.450^†	0.010	0.588	0.010
	Exonic relative abundance	0.136*	0.014	0.699	0.009
SRall	Exonic density	0.486*	0.003	0.535	0.006
	Intronic density	0.481^†	0.002	0.585	0.010
	Exonic relative abundance	0.163*	0.019	0.580	0.012
ESScomb	Exonic density	0.358^†	0.017	0.613	0.013
	Intronic density	0.492*	0.005	0.614	0.009
	Exonic relative abundance	-0.216^†	0.007	0.707	0.010

*Minimum score cut-off for predicted real exons. ^†Maximum score cut-off for predicted real exons.

Back to article page

ISSN: 1474-760X

Contact us

Submission enquiries: editorial@genomebiology.com
General enquiries: info@biomedcentral.com