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Table 5 Characterization of our high ranking Oryza candidate G-protein coupled receptors

From: Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling

Locus QFC GPCRHMM TMHMM HMMTOP Phobius Pcut-T Pcut-H Query e-value
Upper bin          
   Os01g54784.1 * * 7 (out) 7 (out) 7 (out)    Cand3,4,5 <e-85
   Os01g61970.1 * * 8 (in) 9 (out) 7 (out) 7 (out) 7 (out) Cand7 e-150
   Os01g66190.1 * * 7 (out) 7 (out) 7 (out)    Cand1 e-65
   Os04g36630.1 * * 7 (out) 7 (out) 7 (out)    Cand1 e-60
   Os05g39730.1 * * 6 (in) 7 (out) 7 (out)     
   Os06g04130.1 * * 7 (in) 9 (out) 7 (out) 6 (out) 7 (out) Cand7 e-123
   Os06g09930.1 * * 7 (out) 7 (out) 7 (out) 7 (out) 7 (out) GCR1 e-120
Lower bin          
   Os03g36790.1 * -0.81 8 (in) 8 (in) 7 (out) 7 (out) 7 (out)   
   Os07g01250.1 * -1.16 7 (out) 7 (out) 7 (out)     
   Os02g40550.1 * -1.17 8 (in) 8 (in) 7 (out) 7 (out) 7 (out) Cand7 e-111
   Os04g42960.1 * -4.39 8 (in) 9 (out) 7 (out) 7 (out) 8 (in) Cand7 e-120
   Os03g54920.1 * -8.01 7 (in) 6 (out) 7 (out)    Cand2,8 <e-96
   Os02g45870.1 * -9.73 6 (in) 7 (out) 7 (out)     
  1. High ranking Oryza candidate GPCRs that are orthologous to our Arabidopsis candidate GPCRs demonstrated to interact with the Arabidopsis Gα subunit are shown in bold and BLAST e-values are provided to support their identification (see Table 1 for additional details).