Peptide evidence indicating an ORF where release4 annotation does not predict an ORF. The position of ORF X-3-4725402-4726856 in the genome scaffold is indicated by a red line on the grey track at the top of the figure and this region is expanded below, the red triangle demarking the ORF length. Different gene annotation models are presented one above the other bellow the scaffold. Predicted exons are indicated as blue boxes, linked by zigzag lines to indicate the position of exon/intron boundaries. The predicted sequence for TgGlmHMM_3355 is shown as an insert; sequence for which there is matching peptide evidence is shown in red. The peptide that spans an intron-exon boundary is shown in purple. Peptides aligning with this region are shown in yellow and the detailed MS information for one is shown, including the predicted sequence. Peptides that align with the release4 or alternative gene annotations are indicated on different lines. ESTs are shown as dark blue or brown boxes.