Table 2 MSigDB C2 gene sets most significantly enriched in groups 1-3
Upregulated genes | Downregulated genes |
|---|---|
Group 1 | Â |
   eDEV500 | lDEV500 |
   STEMCELL_NEURAL_UP | SANSOM_APC_5_DN |
   eDEV200 | NAKAJIMA_MCS_UP |
   TARTE_PLASMA_BLASTIC | TARTE_MATURE_PC |
   STEMCELL_EMBRYONIC_UP | CALCIUM_REGULATION_IN_CARDIAC_CELLS |
   PRMT5_KD_UP | LEE_DENA_DN |
   CANCER_NEOPLASTIC_META_UP | SMOOTH_MUSCLE_CONTRACTION |
   LI_FETAL_VS_WT_KIDNEY_DN | YAO_P4_KO_VS_WT_UP |
   eDEV100 | lDEV200 |
   MOREAUX_TACI_HI_IN_PPC_UP | LEE_ACOX1_DN |
Group 2 | Â |
   HOFFMANN_BIVSBII_BI_TABLE2 | FLECHNER_KIDNEY_TRANSPL_REJ_DN |
   YU_CMYC_UP | AGEING_KIDNEY_SPECIFIC_DN |
   DNA_REPLICATION_REACTOME | CHANG_SERUM_RESPONSE_DN |
   eDEV500 | LE_MYELIN_DN |
   SERUM_FIBROBLAST_CORE_UP | AGEING_KIDNEY_DN |
   CMV_IE86_UP | VENTRICLES_UP |
   CHANG_SERUM_RESPONSE_UP | CARIES_PULP_DN |
   G1_TO_S_CELL_CYCLE_REACTOME | UVB_NHEK1_UP |
   PEART_HISTONE_DN | SMOOTH_MUSCLE_CONTRACTION |
   GENOTOXINS_ALL_4HRS_REG | BRCA_ER_POS |
Group 3 | Â |
   SERUM_FIBROBLAST_CELLCYCLE | FLECHNER_KIDNEY_TRANSPL_REJ_DN |
   BRCA_ER_NEG | AGEING_KIDNEY_DN |
   TARTE_MATURE_PC | IDX_TSA_UP_CLUSTER6 |
   DAC_PANC_UP | AGEING_KIDNEY_SPECIFIC_DN |
   SANSOM_APC_5_DN | DIAB_NEPH_DN |
   NAKAJIMA_MCS_UP | CARIES_PULP_DN |
   CANCER_UNDIFFERENTIATED_META_UP | MITOCHONDRIA |
   HIF1_TARGETS | BRCA_ER_POS |
   LEE_TCELLS3_UP | VENTRICLES_UP |
   GENOTOXINS_ALL_4HRS_REG | HEARTFAILURE_ATRIA_DN |