Asymmetric histone modifications between the original and derived loci of human segmental duplications

Table 1 Summary of source data

Data type	Total data points for the human genome	Points within SDs
H2AZ	7,536,100	152,848
H2BK5me1	8,942,880	184,251
H3K27me1	10,047,279	196,347
H3K27me2	9,070,882	180,054
H3K27me3	8,970,141	176,060
H3K36me1	8,077,127	164,151
H3K36me3	13,572,575	313,579
H3K4me1	11,322,526	213,535
H3K4me2	5,447,902	100,330
H3K4me3	16,845,478	361,316
H3K79me1	10,041,806	213,775
H3K79me2	2,058,068	40,023
H3K79me3	8,114,474	240,709
H3K9me1	9,311,627	170,633
H3K9me2	9,782,127	188,748
H3K9me3	6,348,997	147,639
H3R2me1	9,560,224	208,646
H3R2me2	6,521,560	147,126
H4K20me1	11,015,873	205,009
H4K20me3	5,720,089	370,598
H4R3me2	7,357,597	173,684
Pol II	4,150,378	85,849
CTCF	2,947,043	65,080
H3K4me3, ES	478,213	37,413
H3K27me3, ES	257,574	24,480
RefSeq genes	18,957	3,366
Duplicated pseudogenes	2,550	1,276
Processed pseudogenes	8,234	2,786
Other pseudogenes	6,809	2,412

In the analyses of histone modifications and transcription factor binding, a data point is a read (that is, tag) from ChIP sequencing. The third column lists the numbers of ChIP tags (or genes, or pseudogenes) within the human SDs.

ISSN: 1474-760X