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Table 2 Top 25 most specific transcripts in the pancreas SAGE libraries

From: Identification of transcripts with enriched expression in the developing and adult pancreas

Tag Accession/location Symbol Pdx1-GFP+ (TS17) Pdx1-GFP+ (TS19) Neurog3-GFP- (TS20) Neurog3-GFP+ (TS20) Neurog3-GFP+ (TS 21) Neurog3-GFP+ (TS22) Whole (TS22) Whole (TS26) Ducts Islets MaxS
TCCCGCCGTGAAGTGGA NM_008387 Ins2 0* 0.31 0 13.11 57.43 3,298.9 4.07 139.28 1,422.4 2,2471.19 62.72
TTCTGTCTGGGCTTCCT NM_023333 2210010C04Rik 0 0 0 0 0 0 0 77.65 651.97 109.03 33.43
GCCCTGTTGGTGCACTT NM_008386 Ins1 0 2.83 0 45.56 19.59 839.25 6.11 9.86 207.52 3,116 27.90
TTAGGAGGCTGCTGCTG NM_026925 Pnlip 0 0 0 0 0 0 0 0 1,760.99 116.04 18.10
CCCTGGGTTCAGGAGAT NM_025583 Ctrb1 0 0.31 0 0 31.21 74.36 17.31 3,162.83 1,443.41 385.12 18.05
GCCCTGTGGATGCGCTT NM_008387 Ins2 0 0 0 0 0.33 16.27 0 0 15.96 432.14 17.58
GTGTGCGCTGGTGGCGA NM_007919 Ela2 0 0 0 0 0 0 0 69.03 181.48 4 11.75
GCATCGTGAGCTTCGGC NM_007919 Ela2 0 0 0 0 0 2.32 0 1,329.96 2,680.13 1,156.37 11.24
GTGTGCGCCGGCGGCGA NM_026419 Ela3 0 0 0 0 0 1 1.02 636.02 369.67 23.01 11.14
ACCACCTGGTAACCGTA NM_008100 Gcg 7.5 63.26 0.65 2,554.97 1,952.71 550.42 34.63 25.88 124.34 326.1 10.99
AAAGTATGCAAATAGCT NM_026918 1810010M01Rik 0 0 0 0 0 0 0 194.75 934.27 459.15 9.90
CAGACTAAGTACCCATA NM_009885 Cel 0 0 0 0 0.66 1 0 750.65 375.55 16.01 8.81
TTTTACTTCTAAGAGTC NM_021331 G6pc2 0 0 0 0.31 0 3.32 0 0 5.88 221.07 7.74
CCCGGGTGCAAGAAGAA NM_018874 Pnliprp1 0 0 0 5.93 12.62 18.26 16.3 1,135.22 250.37 8 7.40
TCCCTTCAACCTTAGAC NM_011271 Rnase1 0 0 0 0 0 0.33 0 221.87 1,249.33 170.05 6.48
TTAAACCAGAGTTCATA NM_023333 2210010C04Rik 0 0 0 0 0 0 0 0 10.08 0 5.66
GCCTACAACTAAACTGT NM_023182 Ctrl 0 0.31 0 0 0 0 0 27.12 491.5 195.06 5.46
GCACCAAGTACACATAT NM_029706 Cpb1 0 0 0 0 0 0 0 303.22 209.2 21.01 5.11
TTGCGCTTCCTGGTGTT NM_033612 Ela1 0 0 0 0 0 0 0 0 8.4 0 4.93
TGGGAGTGGAGGATGCC NM_026925 Pnlip 0 0 0 0 0 0 0 0 29.41 9 4.83
TTCCAAGTGGAGGAGGT NM_018874 Pnliprp1 0 0 0 0.31 0 0 10.18 163.93 36.97 1 4.78
CTAAGAATTGCTTTAAA NM_010491 Iapp 0 0.31 0 3.43 6.64 49.8 0 2.47 25.21 170.05 4.50
CAGTCCATCAACGACGC NM_018809 Ptf1a 0 0 0 0 0 0 7.13 0 0 0 4.36
CAAAGAATGCAATCTGA nt_039700   0 0 0 0 0 0 7.13 0 0 0 4.36
CTTGCAGTCTGAGTTCG nt_039413   0 0 0 0 0 0 7.13 0 0 0 4.36
  1. *Tag counts are shown as tags per 100,000. This indicates the total number of times a given SAGE tag appears in the library per 100,000 tags and is used to normalize for libraries of varying size. S is the specificity of the tag. Specificity is calculated as described in the Materials and methods. The maximum S in any one of the libraries created here is indicated.