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Table 7 Database content

From: Assignment of isochores for all completely sequenced vertebrate genomes using a consensus

    %DNA classified to isochore families in the consensus map Confidence
Genome   No. of segments* L1 L2 H1 H2 H3 Am Avg. SD
Bos taurus Cow 48 8.6 45.1 28.4 11.9 3.44 0.14 2.6 0.70
Canis familiaris Dog 36 25.8 32.5 20.3 11.3 5.05 0.16 2.6 0.71
Danio rerio Zebrafish 22 76.6 20.4 1.9 0.4 0.12 0.23 2.6 0.74
Danio rerio Zebrafish 22 78.1 20.1 1.4 0.3 0.08 0.04 2.6 0.76
Drosophila melanogaster Fruit fly 1 2.6 20.5 70.8 5.7 0.06 0.02 2.6 0.76
Equus ferus caballus Horse 32 22.1 37.7 22.8 12.5 4.57 0.16 2.6 0.71
Gallus gallus Chicken 11 16.2 40.3 26.4 10.6 3.23 1.16 2.2 0.58
Gasterosteus aculeatus Stickleback 6 0.0 3.4 73.7 22.2 0.22 0.04 2.7 0.77
Homo sapiens Human 24 22.6 33.6 22.2 11.1 3.20 0.13 2.7 0.73
Homo sapiens Human 31 22.8 33.2 22.7 11.2 3.01 0.13 2.5 0.70
Mus musculus Mouse 15 7.4 40.0 34.9 14.2 0.33 0.02 2.6 0.68
Mus musculus Mouse 17 7.9 39.5 34.6 14.2 0.50 0.01 2.6 0.72
Monodelphis domestica Opossum 32 49.1 36.6 9.7 2.3 0.57 0.54 2.5 0.72
Monodelphis domestica Opossum 32 49.5 35.8 10.2 2.3 0.55 0.64 2.5 0.72
Ornithorhynchus anatinus Platypus 8 0.2 22.4 61.7 14.3 1.25 0.06 2.7 0.75
Oryzias latipes Medeka 16 3.5 55.3 30.7 2.5 0.14 0.12 2.7 0.75
Pan troglodytes Chimpanzee 67 22.4 32.2 21.6 10.5 2.90 0.22 2.6 0.72
Macaca mulatta Macaque 72 24.4 35.2 22.7 11.0 3.06 0.35 2.6 0.71
Rattus norvegicus Rat 63 7.6 38.0 34.5 15.7 0.74 0.12 2.6 0.72
Tetraodon nigroviridis Pufferfish 4 0.1 5.7 49.3 34.8 3.16 0.15 2.6 0.75
  1. *Number of segments in the consensus map in thousands. Ambiguous amount of DNA that could not be assigned to one of the five isochore families L1 to H3 in the consensus map. Assignment confidence of all stretches in the consensus map: average and standard deviation. Avg., average; SD, standard deviation.