Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria

Table 1 Summary of genome sequences used in this study

Strain	Sub-cluster	Clade	Location of isolation	Coordinates	Depth (m)	Genome size (Mbp)	Status	Scaffolds	Contigs	rRNA	Genes	%GC	References
Synechococcus
CC9311	5.1	I	California current, Pacific (coastal)	32°00'N, 124°30'W	95	2.61	Complete: CP000435	1	1	2	2,944	52.5	[27]
CC9605	5.1	II	California current, Pacific (oligotrophic)	-	51	2.51	Complete: CP000110	1	1	2	2,645	59.2	This work
WH8102	5.1	III	Tropical Atlantic	22°30'N, 65°36'W		2.43	Complete: BX548020	1	1	2	2,583	59.4	[26]
CC9902	5.1	IV	California current, Pacific (oligotrophic)	-	5	2;23	Complete: CP000097	1	1	2	2,358	54.2	This work
BL107	5.1	IV	Blanes Bay, Mediterranean Sea	41°43'N, 3°33'E	1,800	2.28	WGS: AATZ00000000	1	6	2	2,553	54.2	This work
WH7803	5.1	V	Sargasso Sea	33°45'N, 67°30'W	25	2,37	Complete: CT971583	1	1	2	2,586	60.2	This work
WH7805	5.1	VI	Sargasso Sea	33°45'N, 67°30'W		2.62	WGS: AAOK00000000	1	13	2	2,934	57.5	This work
RS9917	5.1	VIII	Gulf of Aqaba, Red Sea	29°28'N, 34°55'E	10	2.58	WGS: AANP00000000	1	9	2	2,820	64.8	This work
RS9916	5.1	IX	Gulf of Aqaba, Red Sea	29°28'N, 34°55'E	10	2.66	WGS: AAUA00000000	1	4	2	3,009	59.8	This work
WH5701	5.2	-	Long Island Sound	-	-	2.86*	WGS: AANO00000000	2	9	2	3,129	66.0	This work
RCC307	5.3^†	-	Mediterranean Sea	39°10'N, 6°17'E	15	2.22	Complete: CT978603	1	1	1	2,583	60.8	This work
Prochlorococcus
MIT9313		LL	Northern Atlantic	37°05'N, 68°02'W	135	2.41	Complete: BX548175	1	1	2	2,330	50.7	[22]
SS120		LL	Sargasso Sea	28°59'N, 64°21'W	120	1.75	Complete: AE017126	1	1	1	1,930	36.4	[48]
MED4		HLI	Mediterranean Sea	43°12'N, 06°52'E	5	1.66	Complete: BX548174	1	1	1	1,763	30.8	[22]

*The WGS release includes 135 contigs; many of these are very small and are likely to be from a co-cultured contaminant. ^† This work; formerly subcluster 5.1, clade X [12].

ISSN: 1474-760X