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Table 1 Correlation between predicted and previously characterized tissue-specific miRNA expression

From: Individual mRNA expression profiles reveal the effects of specific microRNAs

miRNAs Brain Heart Kidney Liver Lung Ovary SM Testes
let-7 *1,2,3 *1,2,3,4 *1,3,4,6 *2 *1,8 * *1 *3,9
miR-1/206 2 *1,2,4,5 1 *2 1   1,5  
miR-10    *4,6,7    *7   
miR-101 *2   4 *1    * 9
miR-122a 3    *1,2,3     9
miR-124a *1,2        
miR-125 *1,2 *1,3,4 *1,4 1 *1,3 *   
miR-128 *1,2   *   *1 * *  
miR-133 2,3 *1,2 1     *1,2  
miR-136 2        *
miR-137 *1,2    * * *   
miR-140 *   4      
miR-144   2   *     
miR-146 3 2,4 4   * *   
miR-15 *2,3 1,2,3 *4,6   *1,3 *   *3,9
miR-150    4    *   
miR-153 *1,2 * * *     
miR-190 1   *7      
miR-193    1,7,4   1   *  
miR-196 * * *1,4   3 *7 * *
miR-199   4 4 1    *  
miR-204        * *
miR-24 2,3 *2 1,4,6   *1,8 *   
miR-26 1,2,3 1,4 1,4,6 1,2 1   * 1  
miR-27 *2,3 *2 *4,6   *1,8 * * *9
miR-29 *1,2 2,4 *4,6   1    
miR-30 *1,2,3 *2,4 *1,4,6 *1,2 *1 * *1 *9
miR-31 *        
miR-326   *     *   
miR-33    4     * *
miR-330     *     
miR-331 * 3   * * *3 *   
miR-335         *
miR-34 3      *   *9
miR-365 3    *     
miR-370    * * * *   *
miR-375 *        
miR-378 *    *    *  
miR-448 * * * * *   * *
miR-503 *3 3 3   3    3
miR-9 *1,2        
  1. All miRNAs for which expression of predicted target genes (according to TargetScan) was lower than expected in ≥ 1 tissue (p < 0.1) are listed and the tissues marked with an asterisk. Tissues in which miRNA expression has been experimentally characterized are indicated by the number of the appropriate reference: 1, Sempere et al. [29]; 2, Lagos-Quintana et al. [28]; 3, Gu J et al. [47]; 4, Naraba and Iwai [48]; 5, Zhao Y et al. [49]; 6, Lagos-Quintana et al. [50]; 7, Lagos-Quintana et al. [51]; 8, Hayashita et al. [52]; 9, Yu et al. [53]). Cells with both a reference number and asterisk indicate the overlap between our predicted expression pattern and the experimental data. SM, skeletal muscle.