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Table 7 Names and sequence information of ten mammals and other vertebrates

From: CpG island density and its correlations with genomic features in mammalian genomes

Common name

Species name

Sequence build

Data source

Mammal

   

   Human

Homo sapiens

35.1

NCBI [44]

   Chimpanzee

Pan troglodytes

2.1

NCBI [44]

   Macaque

Macaca mulatta

1.1

NCBI [44]

   Mouse

Mus musculus

34.1

NCBI [44]

   Rat

Rattus norvegicus

4.1

NCBI [44]

   Dog

Canis familiaris

2.1

NCBI [44]

   Cow

Bos taurus

3.1

NCBI [44]

   Horse

Equus caballus

1.1

NCBI [44]

   Opossum

Monodelphis domestica

2.1

NCBI [44]

Platypus*

Ornithorhynchus anatinus

1.1

NCBI [44]

Non-mammal vertebrate

   

   Chicken†

Gallus gallus

2.1

NCBI [44]

   Green anole lizard‡

Anolis carolinensis

anoCar1

UCSC [30]

   Tetraodon

Tetraodon nigroviridis

tetNig1

UCSC [30]

   Stickleback

Gasterosteus aculeatus

gasAcu1

UCSC [30]

   Medaka

Oryzias latipes

oryLat1

UCSC [30]

   Zebrafish

Danio rerio

danRer5

UCSC [30]

Fugu‡

Takifugu rubripes

fr2

UCSC [30]

  1. *The platypus genome was partially assembled. Only chromosomes 1-7, 10-12, 14, 15, 17, 18, 20, X1-X3, and X5 were available. †Only chromosomes 1-28, 32, W, and Z were available. ‡No assembled chromosomes.