Skip to main content

Table 6 The distribution of repetitive DNA in putative heterochromatin and euchromatin in assembled anchored genome of T. castaneum

From: Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome

Repeat element Total length (kb) Amount in heterochromatin (kb) Amount in euchromatin (kb) Percentage in heterochromatin Percentage in euchromatin
Total anchored DNA 137,758 54,754 83,004 39.70 60.30
HighA 8,729 5,633 3,096 64.53 35.47
Mid 8,769 5,633 3,096 59.00 41.00
Low 4,915 2,893 2,022 58.86 41.14
HighB 2,045 267 1,778 13.06 86.94
Non-LTR 1,370 962 408 70.22 29.78
LTR 1,042 896 312 74.17 25.83
DNA transposon 2,579 1,963 616 76.11 23.89
Microsatellite 439 188 251 42.82 57.18
Minisatellite 2,593 1,152 1,441 44.43 55.57
Tandem satellites 2,621 646 1,975 24.65 75.35