From: A sequence-based survey of the complex structural organization of tumor genomes
 | Library name | |||||||
---|---|---|---|---|---|---|---|---|
 | AA9 | B421 | CHORI-514 | MCF7 | PM-1 | CHORI-510 | CHORI-518 | CHORI-520 |
Clinical sample designation | AA9 | B421 | S104 | MCF-7 | 25-48 | 860-7 | BT-474 | SK-BR-3 |
Organ site | Brain | Breast | Breast | Breast cancer adenocarcinoma (metastasis - pleural effusion) | Prostate metastasis | Ovarian carcinoma | Ductal carcinoma | Breast cancer adenocarcinoma (metastasis - pleural effusion) |
Therapies applied | Radiotherapy | Chemotherapy 4 months before surgery (CMF) | No radiation therapy or chemotherapy before surgery | N/A | Hormone ablation, palliative radiotherapy | No therapy before surgery | N/A | N/A |
Patient status | Deceased | Deceased, no recurrence | No recurrence for 10 years | N/A | Deceased | Tumor recurred within 13 months | N/A | N/A |
Total amount of tumor material used for library construction (mg) | 100 | 150 (20 mg effective) | 100 | N/A | 50 | 200 | N/A | N/A |
Average clone size (± standard deviation; kb) | 129.1 ± 38.3 | 136.4 ± 29.2 | 166.1 ± 53.2 | 148.0 ± 30 | N/D | 149.3 ± 28.8 | 179 ± 23 | 154 ± 25 |