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Table 1 Overall statistics of generated clusters from all trans fragments

From: Functionally important segments in proteins dissected using Gene Ontology and geometric clustering of peptide fragments

FL

Total fragments

Total number of clusters with >2 fragments (% fragments clustered)

Largest cluster

   

Size (% of total fragments)

Compactness* (SD)

5

455,305

5,544 (98.8)

121,220 (27)

2.92 (1.8)

6

446,479

8,466 (97.3)

106,020 (24)

2.62 (1.5)

8

429,793

15,617 (92.1)

79,646 (19)

2.23 (1.2)

10

414,207

22,120 (83.7)

58,150 (14)

2.0 (1.0)

12

399,615

26,228 (72.9)

40,935 (10)

1.81 (0.87)

14

385,866

26,778 (61.2)

28,313 (7)

1.68 (0.77)

16

369,760

25,455 (50.8)

19,469 (5)

1.56 (0.70)

18

360,537

23,302 (41.2)

13,519 (4)

1.45 (0.63)

20

348,824

21,079 (33.4)

9,551 (3)

1.37 (0.59)

22

337,679

18,646 (28.8)

6,804 (2)

1.29 (0.55)

24

327,010

16,132 (21.4)

4,966 (2)

1.22 (0.52)

  1. *(Average of the distances of all fragments in a cluster from its center)/(2 × FL). SD, standard deviation.