|  | O. sativa miRNA ID hits by wild rice species* |  | |||
---|---|---|---|---|---|---|
O. sativa miRNA family | Target mRNA class | O. nivara | O. rufipogon | O. glaberrima | O. punctata | Total no. of loci |
miR156 | ND | Â | d | Â | Â | 1 |
miR159 | MYB and TCP TFs | e | b | Â | Â | 2 |
miR160 | ND | Â | Â | d | Â | 1 |
miR162 | DICER-LIKE 1 | Â | Â | b | Â | 1 |
miR164 | ND | Â | Â | a | Â | 1 |
miR166 | HD-Zip TFs | f, h, k | h, k, n | h, n | c | 9 |
miR167 | Auxin response factors TFs | a, d, f | j | d | a | 6 |
miR168 | ARGONAUTE | Â | Â | b | Â | 1 |
miR169 | CCAAT binding factor and HAP2-like TFs | n, p | Â | Â | c | 3 |
miR171 | SCARECROW-like TFs | c, e, f | c | c, d | a | 7 |
miR319 | ND | Â | Â | Â | a | 1 |
miR395 | ATP sulphurylases | Â | i, j, k | Â | Â | 3 |
miR396 | GRF TFs, rhodenase-like, and kinesin-like protein B | Â | Â | b | Â | 1 |
miR397 | Laccases and beta-6 tubulin | a | a | Â | Â | 2 |
miR399 | Phosphatase TFs | e | b, e | Â | Â | 3 |
miR418 | ND | Â | x | Â | x | 2 |
miR420 | ND | x | x | x | Â | 3 |
miR441 | ND | b | a, b, c | c | Â | 5 |
miR442 | ND | x | x | x | Â | 3 |
miR446 | ND | x | x | x | Â | 3 |
miR531 | ND | x | x | Â | Â | 2 |
miR535 | ND | x | x | x | x | 4 |
Total no. of loci | Â | 20 | 22 | 15 | 7 | 64 |