Table 1 The 27 GO CAN-processes prioritized by the BN model or the HG enrichment test based on cancer genes from the 'cancer-gene census' database

GO:0006366 transcription from RNA polymerase II promoter

GO:0050794 regulation of cellular process

GO:0045737 positive regulation of cyclin-dependent protein kinase activity

GO:0050789 regulation of biological process

GO:0045786 negative regulation of progression through cell cycle

GO:0065007 biological regulation

GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway

GO:0043283 biopolymer metabolic process

GO:0048268 clathrin cage assembly

GO:0000074 regulation of progression through cell cycle

GO:0000718 nucleotide-excision repair, DNA damage removal

GO:0051726 regulation of cell cycle

GO:0002903 negative regulation of B cell apoptosis

GO:0019219 regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

GO:0031323 regulation of cellular metabolic process

GO:0010225 response to UV-C

GO:0006350 transcription

GO:0006310 DNA recombination

GO:0019222 regulation of metabolic process

GO:0016571 histone methylation

GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO:0060070 Wnt receptor signaling pathway through beta-catenin

GO:0045449 regulation of transcription

GO:0016573 histone acetylation

GO:0006351 transcription, DNA-dependent

GO:0045429 positive regulation of nitric oxide biosynthetic process

GO:0006355 regulation of transcription, DNA-dependent

GO:0006298 mismatch repair

GO:0045786 negative regulation of progression through cell cycle

GO:0009168 purine ribonucleoside monophosphate biosynthetic process

GO:0032774 RNA biosynthetic process

GO:0010332 response to gamma radiation

GO:0043170 macromolecule metabolic process

GO:0045661 regulation of myoblast differentiation

GO:0022402 cell cycle process

GO:0030101 natural killer cell activation

GO:0016070 RNA metabolic process

GO:0046902 regulation of mitochondrial membrane permeability

GO:0007049 cell cycle

GO:0051353 positive regulation of oxidoreductase activity

GO:0048523 negative regulation of cellular process

GO:0051898 negative regulation of protein kinase B signaling cascade

GO:0048519 negative regulation of biological process

GO:0000910 cytokinesis

GO:0044238 primary metabolic process

GO:0000075 cell cycle checkpoint

GO:0048522 positive regulation of cellular process

GO:0001952 regulation of cell-matrix adhesion

GO:0006366 transcription from RNA polymerase II promoter

GO:0042593 glucose homeostasis

GO:0048518 positive regulation of biological process

GO:0014065 phosphoinositide 3-kinase cascade

GO:0009719 response to endogenous stimulus

Median number

Median number