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Figure 4 | Genome Biology

Figure 4

From: Whole genome transcriptome polymorphisms in Arabidopsis thaliana

Figure 4

The additive, dominant and maternal effects of splicing. (a) Quantile-quantile plots of additive (left), dominant (middle) and maternal (right) terms for exonic splicing. The real d scores (y-axis) were plotted against the null d scores (x-axis) obtained by 1,000 permutations. (b) Experimental validation for AT1G51350 intron 8. The relative log intensity (y-axis) of Col (red) and Van (blue) was plotted along chromosomal positions (x-axis), with standard deviation indicated. Annotated exons and introns are indicated as thick and thin black horizontal bars, respectively, at y = 0. The arrows point to the start positions (along the forward strand) of the pair of flanking primers. Gel patterns show from left to right: Van (V) and Col (C) genomic DNA (gDNA), and three replicates of Van and Col cDNA.

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