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Table 6 Twenty-six transcription factors with known functions whose cis-regulatory elements were identified in the genes in the co-expression network

From: Variations in the transcriptome of Alzheimer's disease reveal molecular networks involved in cardiovascular diseases

Transcription factors Number of target genes
ABI4 9
Arnt-Ahr 93
ARR10 6
Broad-complex 3 10
CEBP 20
Gfi 8
HAND1-TCF3 279
Mycn 11
Myf 8
Prx2/PRDX2 17
RELA, REL 10
RUNX1 4
Snail 49
SP1 47
TBP 6
E74A 16
ELK1 16
SPIB 16
Hunchback 6
MAX 11
USF1 11
ZNF42 5-13 27
NFIL3 5
Agamous 8
GAMYB 6
  1. The 26 transcription factors and the number of target genes in module 1 that have a motif in their promoters that match to the binding sites of the known transcription factor.