Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

Table 1 EVM scoring mechanism based on feature class and type

Class	Type	Scoring vector	Feature-specific score
ABINITIO_PREDICTION	Exon	X
ABINITIO_PREDICTION	Intron		X
ABINITIO_PREDICTION	Intergenic	X
TRANSCRIPT	Exon	X
TRANSCRIPT	Intron		X
PROTEIN	Exon	X
PROTEIN	Intron		X
OTHER_PREDICTION	Exon		X
OTHER_PREDICTION	Intron		X

ISSN: 1474-760X