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Table 2 Coverage and gene order of different contigs and scaffolds

From: The tryptophan pathway genes of the Sargasso Sea metagenome: new operon structures and the prevalence of non-operon organization

Contig/Scaffold

Actual length*

Coverage†

Gene order‡

AACY01037482

5934

10.81

D→C→F→B→A

AACY01011678

5668

10.66

Full operon

CH026811

14769

8.78

Full operon

AACY01096779

10932

8.69

E→G→D→C

AACY01096698

2822

8.51

E→G→D→C

AACY01104100

6690

8.21

E→G→D→C→B→A

AACY01008961

7081

7.36

E→G→D→C

AACY01117014

7301

5.94

E→G→D→C

AACY01092457

4603

4.45

E→G→D→C

AACY01074747

3876

4.26

E→G→PLPDE_IV

AACY01046473

3887

3.96

E→G→D→C

AACY01056517

4373

3.85

E→G→D→C

CH025535

76373

3.72

E→G→D→C→F→B→X→A

AACY01039569

5041

3.45

E→G→D→C

AACY01065695

3747

3.37

E→G→D→C

AACY01088195

7958

3.27

E→G→D→C

CH020599

17648

3.18

G→D→C→F

AACY01010663

3644

3.17

E→G→D→C

CH006047

9399

3.03

Full operon

AACY01056487

4038

2.91

E→G→D→C

CH025058

36,150

2.69

B→A→E→G→D→C

CH025585

10777

2.59

Full operon

CH006071

68188

2.53

Full operon

AACY01110889

4437

2.43

F→(EG)

AACY01063516

4094

2.35

E→G→D→C

AACY01027084

3981

2.21

D→C→F→B→A

AACY01064621

5161

2.02

E→G→D→C

AACY01052709

2451

2.00

E→G→D→C

AACY01079380

1515

1.89

G→C

AACY01015506

2202

1.35

E→G→D→C

CH200199

1879

1.00

E→G→D→C

CH199785

1823

1.00

E→G→D→C

CH174161

1722

1.00

E→G→D→C

  1. *Actual length, number of known nucleotides; †Coverage, average number of reads covering each nucleotide; ‡Gene order, of different contigs and scaffolds.