| |
Dendritic cells
|
Myeloid cells
| |
Ratio to DC
|
---|
Probe set ID
|
Gene
|
BDCA1
|
BDCA3
|
pDC
|
Mono
|
Neu
|
CD16 cells
|
CD16
|
Mono
|
Neu
|
---|
APC signature genes
| | | | | | | | | | |
203932_at
|
HLA-DMB
|
8,636*
|
7,929
|
5,894
|
5,194
|
173
|
2,581
|
0.3
|
0.6
|
<0.1
|
205101_at
|
CIITA
|
2,803
|
2,354
|
724
|
531
|
50
|
226
|
<0.1
|
0.2
|
<0.1
|
219574_at
|
MARCH1
|
587
|
777
|
544
|
1,214
|
58
|
810
|
1
|
2
|
<0.1
|
201425_at
|
ALDH2
|
9,279
|
7,841
|
6,034
|
8,504
|
706
|
1,760
|
0.2
|
0.9
|
<0.1
|
222891_s_at
|
BCL11A
|
569
|
747
|
4,502
|
310
|
50
|
213
|
<0.1
|
<0.1
|
<0.1
|
205504_at
|
BTK
|
1,120
|
822
|
1,132
|
1,409
|
281
|
1,786
|
2
|
1
|
0.3
|
202295_s_at
|
CTSH
|
6,197
|
2,528
|
1,211
|
3,949
|
75
|
2,440
|
0.39
|
0.6
|
<0.1
|
213831_at
|
DQA1
|
11,535
|
7,503
|
5,919
|
4,701
|
50
|
252
|
<0.1
|
0.4
|
<0.1
|
215536_at
|
DQB2
|
432
|
391
|
157
|
180
|
81
|
52
|
0.1
|
0.4
|
0.2
|
209312_x_at
|
DRB1
|
14,608
|
14,477
|
13,250
|
11,915
|
228
|
14,007
|
1
|
0.8
|
<0.1
|
209619_at
|
CD74
|
12,533
|
12,210
|
10,498
|
9,020
|
867
|
7,383
|
0.6
|
0.7
|
<0.1
|
210042_s_at
|
CTSZ
|
906
|
848
|
692
|
370
|
153
|
673
|
0.7
|
0.4
|
0.2
|
201560_at
|
CLIC4
|
920
|
305
|
663
|
3,023
|
165
|
354
|
0.4
|
3
|
0.2
|
217388_s_at
|
KYNU
|
2,414
|
1,059
|
2,204
|
3,516
|
50
|
3,738
|
2
|
1
|
<0.1
|
203927_at
|
NFKBIE
|
529
|
272
|
232
|
197
|
63
|
290
|
0.5
|
0.4
|
0.1
|
220998_s_at
|
UNC93B1
|
966
|
850
|
1,938
|
862
|
449
|
1,235
|
0.6
|
0.4
|
0.2
|
Pan-DC signature genes
| | | | | | | | | | |
206674_at
|
FLT3
|
3,032
|
5,883
|
2,169
|
208
|
<50
|
<50
|
<0.1
|
<0.1
|
<0.1
|
219256_s_at
|
SH3TC1
|
1,263
|
899
|
1,128
|
392
|
166
|
858
|
0.7
|
0.3
|
0.1
|
218617_at
|
TRIT1
|
1,159
|
1,246
|
1,851
|
509
|
<50
|
339
|
0.2
|
0.3
|
<0.1
|
231810_at
|
BRI3BP
|
691
|
735
|
836
|
298
|
146
|
279
|
0.3
|
0.4
|
0.2
|
209139_s_at
|
PRKRA
|
846
|
1,067
|
1,440
|
316
|
74
|
497
|
0.3
|
0.2
|
<0.1
|
225764_at
|
ETV6
|
2,172
|
2,432
|
1,726
|
1,143
|
938
|
941
|
0.4
|
0.5
|
0.4
|
208837_at
|
TMED3
|
1,317
|
1,852
|
1,859
|
665
|
<50
|
1,022
|
0.6
|
0.4
|
<0.1
|
219218_at
|
BAHCC1
|
87
|
86
|
250
|
<50
|
<50
|
<50
|
0.2
|
0.2
|
0.2
|
1552256_a_at
|
SCARB1
|
325
|
425
|
942
|
165
|
128
|
59
|
<0.1
|
0.2
|
0.1
|
Non-DC signature genes
| | | | | | | | | | |
219243_at
|
GIMAP4
|
68
|
<50
|
<50
|
4,404
|
3,504
|
1,334
|
20
|
65
|
52
|
221704_s_at
|
VPS37B
|
54
|
<50
|
<50
|
593
|
962
|
487
|
9
|
11
|
18
|
204891_s_at
|
LCK
|
<50
|
<50
|
<50
|
92
|
181
|
65
|
-
|
-
|
-
|
214582_at
|
PDE3B
|
78
|
<50
|
<50
|
129
|
625
|
114
|
1
|
2
|
8
|
Myeloid signature genes
| | | | | | | | | | |
225987_at
|
STEAP4
|
<50
|
<50
|
<50
|
877
|
6,090
|
<50
|
-
|
-
|
-
|
1552773_at
|
CLEC4D
|
<50
|
<50
|
<50
|
452
|
520
|
<50
|
-
|
-
|
-
|
222934_s_at
|
CLEC4E
|
214
|
124
|
133
|
2,837
|
5,885
|
229
|
1
|
13
|
28
|
202974_at
|
MPP1
|
591
|
281
|
377
|
3,721
|
2,408
|
1,341
|
2
|
6
|
4
|
205098_at
|
CCR1
|
93
|
<50
|
115
|
3,712
|
3,627
|
106
|
1
|
32
|
31
|
223044_at
|
SLC40A1
|
769
|
276
|
321
|
5,018
|
3,444
|
<50
|
-
|
6
|
4
|
224341_x_at
|
TLR4
|
94
|
<50
|
<50
|
1,411
|
2,869
|
540
|
6
|
15
|
31
|
204714_s_at
|
F5
|
<50
|
<50
|
<50
|
1,392
|
2,313
|
<50
|
-
|
-
|
-
|
203561_at
|
FCGR2A
|
1,010
|
44
|
51
|
2,985
|
7,151
|
2,857
|
3
|
3
|
7
|
210772_at
|
FPRL1
|
<50
|
<50
|
<50
|
389
|
3,454
|
70
|
3
|
-
|
-
|
204924_at
|
TLR2
|
904
|
211
|
57
|
2,870
|
5,548
|
1,606
|
2
|
3
|
6
|
215223_s_at
|
SOD2
|
1,474
|
946
|
528
|
3,528
|
7,599
|
4,236
|
3
|
2
|
5
|
222218_s_at
|
PILRA
|
1,168
|
150
|
136
|
2,899
|
4,035
|
3,982
|
3
|
2
|
3
|
210423_s_at
|
SLC11A1
|
81
|
60
|
38
|
1,767
|
2,930
|
3,334
|
41
|
22
|
36
|
203045_at
|
NINJ1
|
357
|
66
|
71
|
1,104
|
3,129
|
1,934
|
5
|
3
|
9
|
201669_s_at
|
MARCKS
|
521
|
389
|
<50
|
2,449
|
3,224
|
1,730
|
3
|
5
|
6
|
207697_x_at
|
LILRB2
|
1,271
|
78
|
774
|
3,353
|
3,711
|
4,903
|
4
|
3
|
3
|
1553297_a_at
|
CSF3R
|
1,902
|
409
|
156
|
3,433
|
6,687
|
282
|
0.2
|
2
|
4
|
220088_at
|
C5AR1
|
56
|
34
|
93
|
2,316
|
5,099
|
3,824
|
41
|
25
|
55
|
221698_s_at
|
CLEC7A
|
3,229
|
4,295
|
79
|
6,642
|
7,061
|
5,680
|
1
|
2
|
2
|
204204_at
|
SLC31A2
|
442
|
187
|
<50
|
1,579
|
2,047
|
1,671
|
4
|
4
|
5
|
- *Average expression across replicates. Mono, monocyte; neu, neutrophil.