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Table 3 Typical results from DetectiV

From: DetectiV: visualization, normalization and significance testing for pathogen-detection microarray data

GSM40806

GSM40810

GSM40820

Virus

p value

Mean

Virus

p value

Mean

Virus

p value

Mean

Human papillomavirus type 18

4.1E-10

6.8

Human rhinovirus sp.

9.9E-12

4.1

Human herpesvirus 5

5.3E-16

0.57

Human endogenous retrovirus K115

0.000016

4

Human rhinovirus A

2.3E-09

4.1

Respiratory syncytial virus

1.1E-09

4.26

Halovirus HF2

0.0017

2.1

Enterobacteria phage M13

2.2E-07

5.7

Human rhinovirus sp.

5.9E-08

0.75

Human papillomavirus type 45

0.002

3.3

Human rhinovirus 16

6.2E-07

3.5

Human rhinovirus B

1.4E-07

0.47

Subterranean clover stunt virus

0.0032

2.6

Human rhinovirus 1B

0.000001

3.5

Human rhinovirus A

6E-07

0.75

  1. Top five hits from three microarrays showing typical results from DetectiV. All have been sorted by p value. GSM40806 and GSM40810 have been filtered such that mean ≥ 1.