From: The embryonic muscle transcriptome of Caenorhabditis elegans
 | Cosmid Name | Common Name | Rank M0 | Rank M24 | KOG (or other description) |
---|---|---|---|---|---|
Muscle | K12F2.1 | myo-3 | 710 | 240 | Myosin class II heavy chain |
structure and function | F11C3.3 | unc-54 | - | 431 | Myosin class II heavy chain |
 | Y11D7A.14 |  | - | 826 | Myosin class II heavy chain |
 | F45G2.2 |  | - | 743 | Myosin class II heavy chain |
 | C36E6.3 | mlc-1 | 93 | 156 | Myosin regulatory light chain, EF-Hand protein superfamily |
 | C36E6.5 | mlc-2 | 329 | 189 | Myosin regulatory light chain, EF-Hand protein superfamily |
 | F09F7.2 | mlc-3 | 279 | 246 | Myosin essential light chain, EF-Hand protein superfamily |
 | F07A5.7 | unc-15 | 18 | 298 | Myosin class II heavy chain |
 | ZK617.1 | unc-22 | 493 | 245 | Projectin/twitchin and related proteins |
 | W06H8.8 | ttn-1 | 168 | 534 | Projectin/twitchin and related proteins |
 | F54E2.3 | ketn-1 | 6 | 154 | Unnamed Protein (Invertebrate Titin-like protein) |
 | K03E6.6 | pfn-3 | 64 | 94 | Profilin |
 | K06A4.3 |  | 584 | 389 | Actin regulatory proteins (gelsolin/villin family) |
 | Y71G12B.11 |  | 4 | 122 | Talin |
 | W03F11.6 | afd-1 | - | 393 | Actin filament-binding protein Afadin |
 | F08A8.6 | tag-138 | - | 474 | Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 |
 | Y66H1B.3 |  | 462 | 784 | Actin-binding cytoskeleton protein, filamin |
 | Y66H1B.2 |  | 119 | 902 | Actin-binding cytoskeleton protein, filamin |
 | R01H10.3 | cor-1 | 766 | 20 | Actin-binding protein Coronin, contains WD40 repeats |
 | Y105E8B.1 | lev-11 | 530 | 508 | Actin filament-coating protein tropomyosin |
 | F42E11.4 | tni-1 | 120 | 215 | Troponin I |
 | ZK721.2 | unc-27 | 236 | 111 | Troponin I |
 | T20B3.2 | tni-3 | 311 | 235 | Troponin I |
 | T22E5.5 | mup-2 | 230 | 166 | Troponin |
 | C14F5.3 | tnt-3 | 173 | 281 | Troponin |
 | ZC477.9 | deb-1 | 13 | 271 | Alpha-catenin |
 | ZK1058.2 | pat-3 | 99 | - | Integrin beta subunit (N-terminal portion of extracellular region) |
 | C29F9.7 | pat-4 | 428 | 401 | Integrin-linked kinase |
 | F54C1.7 | pat-10 | 184 | 53 | Calmodulin and related proteins (EF-Hand superfamily) |
 | C47E8.7 | unc-112 | 436 | 559 | Mitogen inducible gene product (contains ERM and PH domains) |
 | C18A11.7 | dim-1 | 108 | 74 | Immunoglobin and related proteins |
 | K11C4.5 | unc-68 | 438 | 318 | (Ryanodine receptor, Ca2+ release channel) |
 | K11D9.2 | sca-1 | 192 | 31 | Ca2+ transporting ATPase |
 | C18E9.1 | cal-2 | 470 | 547 | Calmodulin and related proteins (EF-Hand superfamily) |
 | C54E10.2 |  | - | 578 | Ca2+ sensor (EF-Hand superfamily) |
 | F21A10.1 |  | 760 | 650 | Ca2+ sensor (EF-Hand superfamily) |
 | K03E6.3 | ncs-3 | 659 | 185 | Ca2+ sensor (EF-Hand superfamily) |
 | F40E10.3 | csq-1 | 157 | 234 | Calsequestrin |
Dystrophin glycoprotein complex | F15D3.1 | dys-1 | 265 | 869 | Dystrophin-like protein |
 | C33G3.1 | dyc-1 | 187 | 774 | Muscular protein implicated in muscular dystrophy phenotype |
 | F30A10.8 | stn-1 | 626 | 476 | Syntrophins (type beta) |
 | F07H5.2 | sgn-1 | 275 | 121 | Gamma/delta sarcoglycan |
 | K01A2.1 | sgcb-1 | 210 | 640 | (Beta-sarcoglycan) |
 | H22K11.4 |  | 415 | 35 | Sarcoglycan complex, alpha/epsilon subunits |
 | F27D9.8 | stn-2 | 92 | - | Syntrophin (type gamma) |
 | T03F7.1 | snf-11 | 507 | 644 | (Sodium-neurotransmitter symporter) |
Transcription factors | Y47D3B.7 | sbp-1 | 326 | 7 | Predicted DNA-binding protein |
 | F46G10.6 | mxl-3 | 556 | 8 | Upstream transcription factor 2/L-myc-2 protein |
 | T20B3.3 | srh-215 | - | 52 | Predicted olfactory G-protein coupled receptor |
 | T26C11.1 | tbx-41 | - | 127 | TBX2 and related T-box transcription factors |
 | T04C10.4 | atf-5 | - | 175 | Activating transcription factor 4 |
 | C29G2.5 | srt-58 | - | 314 | 7-transmembrane receptor |
 | F40G9.11 | mxl-2 | - | 315 | bHLHZip transcription factor BIGMAX |
 | W07G1.3 | zip-3 | - | 352 | Activating transcription factor 4 |
 | D1081.2 | unc-120 | 353 | 331 | Regulator of arginine metabolism and related MADS box-containing transcription factors |
 | T27C4.4 | egr-1 | - | 346 | Histone deacetylase complex, MTA1 component |
 | Y46H3D.6 | nhr-237 | - | 432 | Hormone receptors |
 | C33G8.6 | nhr-42 | - | 515 | Hormone receptors |
 | C49D10.2 | nhr-166 | - | 529 | Nuclear hormone receptor |
 | T24A6.11 | nhr-222 | - | 527 | Nuclear hormone receptor |
 | F45E4.9 | hmg-5 | - | 540 | HMG box-containing protein |
 | H05G16.1 | frm-3 | - | 655 | Rho guanine nucleotide exchange factor CDEP |
 | T22H6.6 | gei-3 | - | 643 | HMG-box transcription factor Capicua and related proteins |
 | C10G8.7 | ceh-33 | 608 | 670 | Transcription factor SIX and related HOX domain proteins |
 | C10G8.6 | ceh-34 | 354 | 671 | Transcription factor SIX and related HOX domain proteins |
 | B0414.2 | rnt-1 | 91 | 667 | Runt and related transcription factors |
 | Y46H3D.7 | nhr-238 | - | 695 | Hormone receptors |
 | ZC64.3 | ceh-18 | - | 685 | Transcription factor OCT-1, contains POU and HOX domains |
 | F44E2.6 |  | - | 746 | Predicted pilin-like transcription factor |
 | F41B5.9 | nhr-182 | - | 849 | Hormone receptors |
 | B0304.1 | hlh-1 | 142 | 83 | Myogenic helix-loop-helix transcription factor |
 | R13A5.5 | ceh-13 | 324 | - | Transcription factor zerknullt and related HOX domain proteins |
 | F28B12.2 | egl-44 | 451 | - | TEF-1 and related transcription factor, TEAD family |
 | T14G12.4 | fkh-2 | 433 | - | Transcription factor of the Forkhead/HNF3 family |
 | F38A6.3 | hif-1 | 564 | - | Hypoxia-inducible factor 1/Neuronal PAS domain protein NPAS1 |
 | C37F5.1 | lin-1 | 25 | - | Predicted transcription factor |
 | R03E9.1 | mdl-1 | 378 | - | Upstream transcription factor 2/L-myc-2 protein |
 | Y5H2B.2 | nhr-13 | 594 | - | Hormone receptors |
 | F58G6.5 | nhr-34 | 715 | - | Hormone receptors |
 | T23H4.2 | nhr-69 | 186 | - | Hepatocyte nuclear factor 4 and similar steroid hormone receptors |
 | Y68A4A.6 | srz-96 | 625 | - | 7-transmembrane receptor |
 | K10D3.3 | taf-11.2 | 452 | - | Transcription initiation factor TFIID, subunit TAF11 |
 | Y65B4BR.5 |  | 250 | - | Transcription factor containing NAC and TS-N domains |
 | K06A9.2 |  | 518 | - | (F-box protein, contains homeobox domain) |
Neuromuscular junction | F09E8.7 | lev-1 | 631 | 173 | Acetylcholine receptor |
 | C35C5.5 | lev-8 | 84 | 757 | Acetylcholine receptor |
 | T08G11.5 | unc-29 | 70 | 400 | Acetylcholine receptor |
 | F21F3.5 | unc-38 | 441 | 427 | Acetylcholine receptor |
 | Y110A7A.3 | unc-63 | - | 78 | Acetylcholine receptor |
 | ZC504.2 | acr-8 | 623 | 749 | Acetylcholine receptor |
 | F25G6.3 | acr-16 | - | 42 | Acetylcholine receptor |
 | T21C12.1 | unc-49 | 416 | - | GABA receptor |
 | K06C4.6 | mod-1 | - | 806 | Ligand-gated ion channel |
 | C27H5.8 | glc-4 | 770 | - | Ligand-gated ion channel |
 | T24D8.1 |  | - | 65 | Ligand-gated ion channel |
 | T27A1.4 |  | 199 | 807 | Ligand-gated ion channel |
 | Y113G7A.5 |  | 752 | - | Ligand-gated ion channel |
 | F22A3.3 | glr-8 | 248 | - | Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits |
 | ZK867.2 |  | 593 | - | (similar to glutamate receptor) |