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Table 2 Across experiment comparison of protein subsets associated with systematic error

From: Coverage and error models of protein-protein interaction data by directed graph analysis

 

Not in Krogan et al. [11]

In Krogan et al. [11]

Not in Gavin et al. [10]

480

181

In Gavin et al. [10]

40

29

 

P = 1.6 × 10-2

Odds ratio = 1.92

  1. Like Table 1, this table also compares the proteins affected by a reciprocity artifact from the datasets of Gavin and coworkers [10] and Krogan and colleagues [11]. The only exception is that the proteins compared were those identified by the binomial tests as having out-degree greater than in-degree. Compared with Table 1, the association between the two datasets is relatively weaker in terms of both the P value and odds-ratio.
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Genome Biology

ISSN: 1474-760X

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