Table 2 Size and composition of BAC groups in the MegaBAC analysis on the human genome and contribution to these groups by BACs present in the tail-to-tail groups from mapping onto the cow and/or dog genomes.
From: Using comparative genomics to reorder the human genome sequence into a virtual sheep genome
MegaBAC group | MegaBAC analysis | BACs in tail-to-tail group in cow and/or dog | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | Number of BACs | % False positiona | Clustered (n [%]) | % of MegaBAC group | Fold enrichment clustered | Cow or dog (n) | Dog (n) | Cow (n) |
Tail-to-tail | 84,624 | 0.056% | NA (NA) | 78% | na | 66,111 | 56,598 | 29,424 |
Tail-to-tail outsize | 1,629 | 48% | 451 (28%) | 21% | 2.4 | 350 | 195 | 202 |
Tail-to-head | 2,477 | 2% | 1,811 (73%) | 36% | 1 | 903 | 460 | 578 |
Tail-to-head outsize | 4,134 | 38% | 1,295 (31%) | 18% | 2 | 762 | 380 | 498 |
Head-to-head | 245 | 10% | 183 (75%) | 7.8% | 0.6 | 19 | 12 | 9 |
Head-to-head outsize | 1,356 | 58% | 47 (3.5%) | 14% | 0.7 | 197 | 63 | 159 |
Break | 27,829 | ~100% | NA (NA) | 9.4% | na | 2,623 | 944 | 1,834 |
Unpaired | 52,663b | na | NA (NA) | 0.1%c | na | 38 | 12 | 28 |
No hits | 18,113 | na | NA (NA) | na | na | 0 | 0 | 0 |