From: Meta-analysis of primary target genes of peroxisome proliferator-activated receptors
Gene (region) | Location | Primer sequences (5'-3') |
---|---|---|
ACOX1 (distal) | -4919 to -4643 | TGAGCTCTTGATCTCCTCCTCAGAGTCATAG GAGTCTAGACTGGCAATCTTAGCAGAGTTC |
ACOX1 (published) | -1646 to -1374 | TGAGCTCTTGAACTAGAAGGTCAGCTGTC GGGTCTAGACTAGCCTGTCTGTAGTCTGTG |
ACOX1 (intron 1) | +599 to +716 | TGAGCTCTTGTGATTCAGGGAGGGTGGAAC GGGTCTAGACTGGCTGCGAGTGAGGAAG |
ACOX1 (intron 2) | +2822 to +3154 | TGAGCTCTTGAGATAGAGTAACTCCTCCTAG GAGTCTAGAGAAGTGTGTCAAAGGGTGTG |
ANGPTL4 (distal) | -6765 to -6535 | TGAGCTCTTGAACTAGAAGGTCAGCTGTC GAGTCTAGAATACACTCATGCAGGGTGAGG |
ANGPTL4 (cluster) | +2829 to +3610 | TGAGCTCTTCTCCGTTCATCTCGAACCAC GAGTCTAGACATCTCAGAGGCTCTGCCTG |
APOC3 (distal 1) | -6429 to -6143 | TGAGCTCTTGCTCAGGCGATAGTTAGAAG GAGTCTAGACTGGATGGTCCCACTCCAGTG |
APOC3 (distal 2) | -4249 to -3886 | TGAGCTCTTGACTATGAGGTGACATCCAGG GAGTCTAGAGGACACACAGGCAGTACGTG |
APOC3 (proximal) | -870 to -568 | TGAGCTCTTGGCAGTGAGGGCTGCTCTTC GGGTCTAGACATCTCTGGGTTTCAATCCAG |
APOC3 (published) | -262 to -3 | ATTTCTAGACAGTCAGCTAGGAAGGAATGAG GGGTCTAGACTAGGGATGAACTGAGCAGAC |
APOC3 (intron) | +2424 to +2722 | TGAGCTCTTGATCACACAACTAATCAATCCTC GAGTCTAGACTCAACTTCACTGGACGACAG |
APOA1 (proximal) | +7701 to +8022 (relative to APOC3 TSS) | TGAGCTCTTCCTTCTCGCAGTCTCTAAGC GAGTCTAGAGCCAACACAATGGACAATGG |
CPTIB | -306 to -64 | ATTTCTAGACAGAGTCTCGTGAGGATGGTG GGGTCTAGAGTTAGCGTTCATGCTGCCAG |
PPARa (distal) | -1376 to -1156 | TGAGCTCTTCTGGCTAACATGTGCAAGAG GGGTCTAGACACTGTGCTATTTGTGGCAG |
PPARa(proximal) | -938 to -634 | TGAGCTCTTCTCCTTGCTCTGGCAGAGTC GGGTCTAGACTCAGAAGTGCGTAGGGTG |
RVRa(distal) | -7279 to -7040 | TGAGCTCTTGACCTTCCCAAGCCAAGAAC GAGTCTAGACACTAACCTCACAGACCACTG |
RVRa(proximal) | -510 to -70 | TGAGCTCTTCTGGAGGTGTTCTCCCTAAG GTGTCTAGACTGCGCAACGACAAGACTG |
RVRa(TSS) | -510 to +119 (subcloned -266 to +119) | TGAGCTCTTCTGGAGGTGTTCTCCCTAAG GTGTCTAGATTTCACTCTGCCAATCTCAGC |
SULT2A1 | -6104 to -5797 | ATTTCTAGACTTGAATGGAAATGCCTGCTC GGGTCTAGAGACTGGGAAGTGGGAGGAGT |
UCP3 (distal) | -9680 to -9349 | TGAGCTCTTCTCTAGTCTAAGTGCCTTGTC GAGTCTAGAGTAACAGTGAGCCTCTGGTCTG |
UCP3 (proximal) | -396 to -89 | TGAGCTCTTGTACCTATCTCATAGGATTGTG GTGTCTAGAGTTGACAGCCTGATCACTTGAC |
UCP3 (cluster) | +2036 to +2303 | TGAGCTCTTCAGGACTATGGTTGGACTGAAG GGGTCTAGAGATGGGAGGAGGCAAGGAAG |
UCP3 (intron) | +5971 to +6236 | TGAGCTCTTCTCGTGCTGAGCACTTTACAC GAGTCTAGACACTTGTTGGGTCCATTCTAAC |
LASS1 (region 1) | -5297 to -4917 | TGAGCTCTTCTGATGTGCAATCTCAGACAG GAGTCTAGACTCAGTCTCCACCATGAAGG |
LASS1 (region 2) | -2819 to -2499 | TGAGCTCTTCCTCCCAGATGTCACCATTG GAGTCTAGACCTCTTTTGCCACTTCCCTC |
LASS1 (region 3) | -1389 to -978 | TGAGCTCTTGTGGAACAGGAGCCATAGAG GGGTCTAGACATCGAGGAAGACACTGGTC |