Skip to main content

Table 2 First induced/repressed pathway and first induced/repressed elementary mode in particular stress conditions

From: Observing metabolic functions at the genome scale

Stress condition

First pathway

P value

First elementary mode (EM1)

P value

Ash [34], repressed

sce00230 (purine metabolism)

2.7e-8

sce00230.em279 (part of purine metabolism)

1e-11

Pentanol [34], repressed

sce00230 (purine metabolism)

3.3e-6

sce00230.em341 (part of purine metabolism)

1.8e-8

Tetrachloro-isophthalonitrile [34], repressed

sce00230 (purine metabolism)

2.5e-8

sce00230.em280 (part of purine metabolism)

3.3e-10

Stationary phase [33], induced

sce00020 (citrate cycle)

3.4e-14

sce00020.em36 (part of citrate cycle)

5.9e-16

Heat shock [32], induced

sce00500 (starch and sucrose metabolism)

3.8e-4

sce00500.em13 (part of starch and sucrose metabolism)

4.2e-6

  1. Results given by BlastSets for particular conditions. The second column gives the most significant full KEGG pathway found to be induced/repressed (that is, the one with the lowest P value, given in the third column). The fourth column gives the most significant elementary mode from EM1 found to be induced/repressed. These results are sorted from the highest to the lowest difference between the two P values.