Table 2 Summary of SNPs within ANC sequences and power CNC sequences associated to differential gene expression
Population | Sequence | Number of tested ANC/CNC sequences | Number of SNPs | Number of probes tested | Number of associations | Number of significant ANC/CNC sequence to gene associations | Number of significant ANC/CNC sequences of those tested | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | 0.01 | 0.001 | 0.0001 | 0.01 | 0.001 | 0.0001 |
CEU | ANC | 387 | 555 | 8,673 | 23,330 | 77 | 9 | 0 | 59 (15%) | 9 (2%) | 0 (0%) |
| Â | Power CNC | 6,232 | 8,388 | 14,906 | 350,309 | 181 | 36 | 18 | 149 (2%) | 33 (1%) | 17 (0%) |
CHB | ANC | 356 | 499 | 8,092 | 21,291 | 83 | 13 | 0 | 56 (16%) | 11 (3%) | 0 (0%) |
| Â | Power CNC | 5,737 | 7,579 | 14,893 | 317,518 | 202 | 41 | 15 | 159 (3%) | 39 (1%) | 15 (0%) |
CHB and JPT | ANC | 342 | 466 | 7,919 | 20,163 | 109 | 11 | 1 | 59 (17%) | 9 (3%) | 1 (0%) |
| Â | Power CNC | 5,474 | 7,162 | 14,852 | 301,636 | 203 | 12 | 1 | 149 (3%) | 12 (0 | 1 (0%) |
JPT | ANC | 355 | 490 | 8,197 | 21,166 | 88 | 12 | 0 | 59 (17%) | 11 (3%) | 0 (0%) |
| Â | Power CNC | 5,674 | 7,531 | 14,852 | 315,476 | 241 | 48 | 20 | 194 (3%) | 42 (1%) | 19 (0%) |
YRI | ANC | 391 | 583 | 9,118 | 24,310 | 113 | 15 | 2 | 64 (16%) | 15 (4%) | 2 (1%) |
| Â | Power CNC | 6,724 | 9,218 | 14,908 | 381,407 | 196 | 32 | 15 | 173 (3%) | 30 (0%) | 14 (0%) |