Table 3 Proteins identified in late growth phase with their bioinformatic analysis and emPAI calculation
Accession no. (NCBI) | Protein | Mowse | PSortB | SignalP | SecP | emPAI | Protein (M%) | Species | |
|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | L | SP | SP | Â | Â | Â | Â |
17984094 | Phosphoenol pyruvate carboxylase (ATP) | 468 | U | No | No | No | 0.300 | 1.013 | Bm |
17983911 | Arginosuccinate synthase | 313 | C | No | No | No | 0.276 | 0.932 | Bm |
17982698 | 50S ribosomal protein L23 | 273 | U | No | No | Y 0.5 | 0.097 | 0.327 | Bm |
17983035 | Glutamyl-tRNA(GLN) amidotransferase subunit B | 263 | C | No | No | No | 0.167 | 0.557 | Bm |
17982203 | Phosphoglycerate kinase | 178 | C | No | No | No | 0.239 | 0.807 | Bm |
17984924 | Periplasmic oligopeptide-binding protein precursor | 176 | P | No | No | Y 0.89 | 0.183 | 0.618 | Bm |
17982826 | DNA-binding protein HU alpha | 170 | U | No | LVA-AV10,11 | Y 0.95 | 0.469 | 1.584 | Bm |
17982691 | 30S ribosomal protein S12 | 169 | U | No | No | Y 0.83 | 0.291 | 0.983 | Bm |
17982154 | Leucine, isoleucine, valine, threonine and alanine binding protein | 157 | P | Yes | AWA-DV28,29 | Y 0.95 | 0.194 | 0.655 | Bm |
17984006 | 3-Hydroxydecanoyl-(acyl-carrier-protein) dehydratase | 149 | C | No | No | No | 0.626 | 2.114 | Bm |
17983192 | General L-amino acid-binding periplasmic protein AAPJ precursor | 132 | P | Yes | ASA-DT24,25 | Y 0.65 | 0.225 | 0.760 | Bm |
17984058 | Phenylalanyl-tRNA synthetase beta chain | 131 | C | No | No | No | 0.054 | 0.182 | Bm |
17984780 | N-methylhydantoinase (ATP-hydrolising) 5-oxoprolinase(EC3.5.2.9) | 125 | C | No | No | No | 0.081 | 0.274 | Bm |
17983089 | Adenylosuccinate lyase | 120 | C | No | No | No | 0.086 | 0.290 | Bm |
17983993 | 30S ribosomal protein S20 | 120 | U | No | No | Y 0.58 | 0.161 | 0.544 | Bm |
17983794 | Hypothetical protein | 119 | C | No | No | No | 0.469 | 1.584 | Bm |
17983437 | Pyruvate, phosphate dikinase | 112 | C | Â | No | No | 0.047 | 0.159 | Bm |
17982937 | Nitrogen regulatory protein P-II | 108 | C | No | No | No | 0.233 | 0.789 | Bm |
17984078 | Thioredoxin C-1 | 108 | C | No | No | Y 0.84 | 0.291 | 0.983 | Bm |
17983171 | Serine hydroxymethyltransferase | 103 | C | No | No | No | 0.167 | 0.564 | Bm |
17984416 | 2,3,4,5-Tetrahdropyridine-2-carboxylate N-succinyltransferase | 101 | C | No | No | No | 0.122 | 0.412 | Bm |
17984012 | 30S ribosomal protein S15 | 95 | U | No | No | Y 0.54 | 0.069 | 0.233 | Bm |
17983482 | Short-chain dehydrogenase | 92 | C | No | No | No | 0.194 | 0.655 | Bm |
49238135 | 3-Oxoacyl-(acyl carrierprotein) reductase | 92 | C | No | No | No | 0.076 | 0.257 | Bh |
17982682 | 50S ribosomal protein L11 | 91 | U | No | AGA-AN17,18 | Y 0.95 | 0.194 | 0.655 | Bm |
17984753 | Alkyl hyroperoxide reductase C22 protein | 85 | C | No | No | No | 0.274 | 0.925 | Bm |
17982411 | Cold shock protein CSPA | 82 | C | No | No | Y 0.81 | 0.584 | 1.972 | Bm |
17983290 | Dihydrodipicolinate synthase | 82 | C | No | ITA-LV22,23 | No | 0.122 | 0.412 | Bm |
17982131 | Leucyl-tRNA synthetase | 77 | C | No | No | No | 0.023 | 0.078 | Bm |
86283673 | Dipeptide ABC transporter, substrate binding | 75 | P | Yes | AFA-ET31,32 | Y 0.91 | 0.072 | 0.243 | Re |
17982712 | 50s ribosomal protein L18 | 74 | U | No | No | No | 0.072 | 0.243 | Bm |
23347767 | Valyl-tRNA synthetase | 73 | C | No | No | No | 0.019 | 0.064 | Bs |
17982719 | 30S ribosomal protein S13 | 72 | C | No | No | No | 0.072 | 0.243 | Bm |
17983459 | Thiol peroxidase | 69 | U | No | No | Y 0.89 | 0.122 | 0.412 | Bm |
17982531 | Hypothtical cytosolic protein | 68 | C | No | No | No | 0.186 | 0.628 | Bm |
17984569 | Osmotically inducible protein C | 68 | U | No | No | Y 0.82 | 0.069 | 0.233 | Bm |
17981953 | Histidinol-phosphate aminotransferase | 66 | C | No | No | No | 0.067 | 0.226 | Bm |
15073728 | Probable isoleucyl-tRNA synthetase protein | 64 | C | No | No | No | 0.038 | 0.128 | Sm |
17984859 | Glutamyl-tRNA(GLN) amidotransferase subunit A | 63 | U | No | No | No | 0.109 | 0.368 | Bm |
17984521 | Urocanate hydratase | 57 | U | No | No | No | 0.069 | 0.233 | Bm |