Table 1 Proteins identified in early growth phase with their bioinformatic analysis and emPAI calculation
Accession no. (NCBI) | Protein | Mowse | PSortB | SignalP SP | SecP | emPAI | Protein (M%) | Species | |
|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | L | SP | Â | Â | Â | Â | Â |
17984580 | GTP-binding tyrosine phosphorylated protein | 189 | C | No | No | No | 0.112 | 0.442 | Bm |
17982767 | 30S ribosomal protein S2 | 158 | C | No | No | No | 0.199 | 0.785 | Bm |
17983035 | Glutamyl-tRNA amidotransferase, beta subunit | 145 | C | No | No | No | 0.117 | 0.461 | Bm |
17984058 | Phenylalanyl-tRNA synthetase beta subunit | 141 | C | No | No | No | 0.079 | 0.311 | Bm |
17982501 | UDP-N-acetylmurate - alanine ligase (cytoplasmic peptidoglycan synthetase | 128 | C | No | No | No | 0.104 | 0.410 | Bm |
17984007 | 3-Oxoacyl-(acyl-carrier-protein) synthase 1 | 110 | C | No | N0 | No | 0.186 | 0.733 | Bm |
17982216 | Hypothetical cytosolic protein | 109 | C | No | No | Y 0.69 | 0.138 | 0.544 | Bm |
17982947 | Methionyl-tRNA synthetase | 101 | C | No | YHA-LL14,15 | No | 0.050 | 0.197 | Bm |
17982718 | Adenylate kinase | 99 | C | No | No | No | 0.178 | 0.702 | Bm |
17984859 | Glutamyl-tRNA amidotransferase, alpha subunit | 87 | U | No | No | No | 0.178 | 0.702 | Bm |
17984546 | Piperideine-6-carboxylate dehydrogenase | 85 | C | No | No | No | 0.076 | 0.300 | Bm |
17982155 | Branched chain amino acid ABC transporter, periplasmic AA binding protein | 83 | P | No | No | No | 0.274 | 1.080 | Bm |
17982770 | Ribosome recycling factor | 82 | C | No | No | No | 0.130 | 0.513 | Bm |
17983887 | Dihydroxy-acid dehydratase | 80 | C | No | AGA-AG20,21 | No | 0.074 | 0.292 | Bm |
17982681 | Transcription antitermination protein nusG | 77 | U | No | No | No | 0.186 | 0.733 | Bm |
17983656 | Glucose-6-phosphate isomerase | 74 | U | No | No | No | 0.084 | 0.331 | Bm |
17984871 | Glucosamine-fructose-6-phosphate aminotransferase (isomerizing) | 74 | C | No | No | No | 0.151 | 0.595 | Bm |
17982453 | Hypothetical protein (immunoreactive 28 kDa omp) | 69 | P | No | AFA-QE28,29 | Y 0.9 | 0.138 | 0.544 | Bm |
17740384 | 30S ribosomal protein S8 | 66 | C | No | No | No | 0.096 | 0.379 | At |
17983241 | Nucleoside diphosphate kinase | 64 | C | No | No | No | 0.156 | 0.615 | Bm |
17983005 | ABC transporter ATP-binding protein | 63 | U | No | No | No | 0.064 | 0.252 | Bm |
17982925 | NAD-dependent malic enzyme, malic oxidoreductase | 62 | U | No | No | No | 0.067 | 0.262 | Bm |
17983949 | 3-Deoxy-manno-oculosonate cytidylyltransferase | 62 | C | No | ANG-YI28,29 | No | 0.052 | 0.205 | Bm |
17983146 | 30S ribosomal protein S9 | 60 | U | No | No | Y 0.70 | 0.146 | 0.576 | Bm |
17982830 | Single-stranded DNA binding protein | 59 | U | No | No | Y 0.82 | 0.172 | 0.678 | Bm |
17982823 | ATP-dependent Clp protease proteolytic subunit | 58 | C | No | No | No | 0.233 | 0.919 | Bm |
17984491 | Lipoprotein (ABC transporter substrate binding protein) | 57 | U | Yes | SHA-ED37,38 | No | 0.076 | 0.300 | Bm |
17982653 | Methionine aminopeptidase | 56 | C | No | No | No | 0.117 | 0.461 | Bm |
17984405 | GTP-binding protein LepA | 51 | C | No | No | No | 0.057 | 0.225 | Bm |
49238170 | 2-Dehydro-3-deoxyphosphooctonate aldolase | 51 | C | No | No | No | 0.138 | 0.544 | Bh |
17982695 | 30S ribosomal protein S10 | 50 | C | No | No | No | 0.194 | 0.765 | Bm |
27353255 | Transriptional regulatory protein | 47 | U | No | SHS-DR12,13 | No | 0.096 | 0.379 | Bj |
86284664 | ABC transporter ATP-binding | 42 | CM | No | No | No | 0.102 | 0.402 | Re |
17984791 | Branched chain amino acid ABC aminotransferase | 40 | C | No | No | No | 0.210 | 0.828 | Bm |