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Table 1 Quantification of GFP expression for each reporter construct

From: Functional diversification of sonic hedgehog paralog enhancers identified by phylogenomic reconstruction

Reporter construct

Notochord >15 cells

Notochord <15 cells

Floor plate >15 cells

Floor plate <15 cells

Ectopic >15 cells

Ectopic <15 cells

Nonexpressing

Total number

0.8shha:gfp

0%

3 ± 1.6%

0%

2.3 ± 0.9%

0%

16 ± 3.5%

84 ± 3.5%

224

0.8shha:gfp:z-shha-I2

57 ± 2.9%

32.9 ± 5.2%

3.4 ± 1.2%

86.5 ± 3%

0%

89.9 ± 3.8%

10.1 ± 4.7%

301

0.8shha:gfp:t-shha-I2

58.8 ± 3.3%

27.1 ± 6.7%

4 ± 0.7%

82 ± 4.6%

0%

86 ± 4%

14 ± 4.9%

272

0.8shha:gfp:l-shh-I2

61.2 ± 8.5%

26.4 ± 5.2%

1.2 ± 0.3%

86.4 ± 3.5%

0%

87.6 ± 3.4%

12.4 ± 4.2%

325

0.8shha:gfp:c-shh-I2

56.1 ± 7.2%

28.9 ± 11.5%

2 ± 0.1%

83.1 ± 4.2%

0%

85 ± 4.3%

15 ± 6.1%

203

0.8shha:gfp:z-shhb-I2

30.2 ± 5.3%

51.6 ± 6.9%

38.1 ± 4.9%

43.7 ± 8.9%

2.5 ± 1%

79.3 ± 4.6%

18.2 ± 5.4%

281

0.8shha:gfp:t-shhb-I2

27.9 ± 7.9%

50.9 ± 7.9%

37.8 ± 5.7%

41 ± 6%

2.1 ± 0.7%

76.8 ± 2%

21.2 ± 3.3%

248

0.8shha:gfp:z-shhb-I2-non.cons.

0%

1.3 ± 1.3%

0%

2.1 ± 0.8%

0%

7.7 ± 2.4%

92.3 ± 3.5%

145

0.8shha:gfp:z-shhb-arC

36.7 ± 5.7%

48.9 ± 7.2%

46 ± 5.4%

39.6 ± 10.3%

3.1 ± 0.3%

82.4 ± 4.8%

14.4 ± 6.9%

409

0.8shha:gfp:z-shha-arC

62.2 ± 5.6%

28.6 ± 2.4%

4.4 ± 1.1%

86.4 ± 3.4%

0%

90.8 ± 3.5%

9.2 ± 4.3%

260

0.8shha:gfp:z-shha-arCΔC1

0%

2.2 ± 0.6%

0%

1.5 ± 0.1%

5.2 ± 0.3%

11.9 ± 1%

82.9 ± 0.9%

135

0.8shha:gfp:z-shha-arCΔC2

46.2 ± 4.3%

31.1 ± 8.8%

5 ± 1.3%

72.2 ± 3.3%

0%

77.2 ± 4.5%

22.8 ± 5.6%

347

0.8shha:gfp:z-shha-arCΔC3

51.2 ± 3.6%

30.5 ± 2.6%

47.1 ± 4.5%

34.6 ± 5.7%

3.7 ± 1.3%

78 ± 1.9%

18.3 ± 3.7%

307

0.8shha:gfp:z-shha-arCΔC4

32.5 ± 5.1%

48.6 ± 6.6%

37.6 ± 3.1%

43.5 ± 4.8%

2.1 ± 1.3%

79.1 ± 5%

18.9 ± 4.7%

359

0.8shha:gfp:z-shha-arC+C4m

36.8 ± 6.2%

41.6 ± 5.4%

42.3 ± 7.2%

36.1 ± 6.7%

2.8 ± 1.6%

75.6 ± 4.5%

21.6 ± 5.1%

174

0.8shha:gfp:z-shhb-arCΔC1

0%

0%

0%

0%

3.8 ± 1.6%

10.7 ± 7.7%

85.5 ± 11.3%

186

0.8shha:gfp:z-shhb-arCΔC3

33.5 ± 3%

40.5 ± 6%

37.8 ± 3.9%

36.2 ± 7.3%

0%

74 ± 3.5%

26 ± 4.3%

230

0.8shha:gfp:z-shhb-arC+C2

23 ± 6.2%

44.6 ± 8.7%

36 ± 5.2%

31.6 ± 7.8%

1.3 ± 1%

66.3 ± 3.2%

32.4 ± 3.2%

203

0.8shha:gfp:z-shhb-arC+C4

45.7 ± 7.2%

43.3 ± 4.7%

8.2 ± 2.4%

80.8 ± 3.8%

0%

89 ± 3.2%

11 ± 3.9%

288

2.7shhb:gfp

72.4 ± 3.1%

19.6 ± 3.3%

0%

92 ± 3.4%

0%

92 ± 3.4%

8 ± 4.2%

308

2.7shhb:gfp:z-shhbI1

68 ± 4.9%

19.8 ± 0.8%

0%

87.8 ± 4.2%

0%

87.8 ± 4.2%

12.2 ± 5.1%

339

2.7shhb:gfp:z-shhbI2

61.4 ± 4.9%

24.7 ± 2.9%

36.4 ± 3.6%

49.7 ± 3.1%

2 ± 0.8%

84.1 ± 5.6%

13.9 ± 7.7%

296

  1. Values are expressed as mean ± standard deviation. GFP, green fluorescent protein.