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Table 3 The genome of Fracisella tularensis supspecies tularensis Schu S4 encodes specific functions

From: Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains

 

Gene accession number

Size of the predicted protein

G+C content (%)

Gene namea

Gene product descriptiona

Functional categoryb

Genes inactivated or deleted in novicida and holarctica subspecies

FTT0097

181

31.1

-

Hypothetical protein FTT0097

Hypothetical

 

FTT0432

469

30.3

speA

Putative arginine decarboxylase

Other metabolism

 

FTT0435

286

34.9

-

Carbon-nitrogen hydrolase family protein

Other metabolism

 

FTT0496

254

33.0

-

Hypothetical protein FTT0496

Hypothetical

 

FTT0525

218

25.9

-

Hypothetical protein FTT0525

Hypothetical

 

FTT0528

125

29.7

-

Hypothetical protein FTT0528

Hypothetical

 

FTT0677c

258

27.2

-

Hypothetical protein FTT0677c

Hypothetical

 

FTT0754c

111

24.0

-

Hypothetical membrane protein

Hypothetical

 

FTT0939c

314

28.2

add

Adenosine deaminase

Nucleotides and nucleosides metabolism

 

FTT1080c

292

24.8

-

Hypothetical membrane protein

Hypothetical

 

FTT1122c

156

36.9

-

Hypothetical lipoprotein

Hypothetical

 

FTT1598

944

34.3

-

Hypothetical membrane protein

Hypothetical

 

FTT1666c

295

27.8

-

3-Hydroxyisobutyrate dehydrogenase

No functional role assigned

 

FTT1667

78

26.5

-

Hypothetical protein FTT1667

Hypothetical

 

FTT1766

218

33.5

-

O-methyltransferase

Cell wall/LPS/capsule

 

FTT1781c

249

30.7

-

Hypothetical protein FTT1781c

Hypothetical

 

FTT1784c

102

23.2

-

Hypothetical protein FTT1784c

Hypothetical

 

FTT1787c

203

28.7

-

Transporter, LysE family

Transport

 

FTT1789

264

29.1

-

Hypothetical protein FTT1789

Hypothetical

Sequences specific to the tularensis subspecies

FTT1066c

124

27.6

-

Hypothetical protein FTT1066c

Hypothetical

 

FTT1068c

192

20.7

-

Hypothetical protein FTT1068c

Hypothetical

 

FTT1069c

301

28.3

-

Hypothetical protein FTT1069c

Hypothetical

 

FTT1071c

168

33.5

-

Hypothetical protein FTT1071c

Hypothetical

 

FTT1072

209

31.6

-

Hypothetical protein FTT1072

Hypothetical

 

FTT1073c

123

31.6

-

Hypothetical protein FTT1073c

Hypothetical

 

FTT1308c

202

29.1

-

Hypothetical protein FTT1308c

Hypothetical

 

FTT1580c

176

26.4

-

Hypothetical protein FTT1580c

Hypothetical

 

FTT1791

120

30.1

-

Hypothetical protein FTT1791

Hypothetical

  1. aAs published in the annotation of the genome of Schu S4. bThe functional categories were assigned manually for this study. LPS, lipopolysaccharide.