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Table 1 Metabolic pathways that have been modelled by direct annotation of original literature data

From: GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosismetabolism

Pathway References
Biosynthetic pathways
   Arabinogalactan [60,61]
   Mycolic acids [62]
   Trehalose monomycolate, trehalose dimycolate [63]
   Dimycocerosate esters (DIMs) [64-66]
   Phenolic glycolipid (PGL) [67]
   Sulfolipid SL-1 [68-70]
   Phosphatidylinositol mannosides (PIMS) [71]
   Lipomannan (LM)  
   Lipoarabinomannan (LAM)  
   Mannosyl β-1-phosphodolichol (MPD) [72]
   Siderophore mycobactin [73]
   Co-factor F420 [74]
   Mycothiol [75]
Catabolic pathways
   Additional beta oxidation pathways  
   Odd and even numbered fatty acid catabolism  
Respiratory pathways
   NADH dehydrogenases, cytochromes [76,77]
   Nitrate as an alternative electron acceptor [78]