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Table 2 TFBSs associated with differential down-regulation of E2F target genes

From: A distance difference matrix approach to identifying transcription factors that regulate differential gene expression

Identifier P value Q-value Factor name Reference
V.CEBPB_01 0.000 0.000 C/EBP [39]
V.CEBP_C 0.000 0.010 C/EBP [39]
V.CDPCR3_01 0.001 0.026 CDP CR3  
V.AP3_Q6 0.002 0.043 AP3  
V.STAT4_01 0.003 0.049 STAT4  
V.SMAD4_Q6 0.003 0.049 SMAD-4 [65]
V.AREB6_04 0.005 0.075 AREB6  
V.CEBPA_01 0.006 0.078 C/EBP [39]
V.GEN_INI3_B 0.009 0.102 GEN_INI  
V.PADS_C 0.011 0.103 PADS  
V.GEN_INI2_B 0.011 0.103 GEN_INI  
V.GEN_INI_B 0.011 0.103 GEN_INI  
V.PAX2_02 0.013 0.106 PAX2  
V.LDSPOLYA_B 0.015 0.110 Poly A  
V.IRF_Q6 0.018 0.130 IRF [36]
V.CEBP_Q2 0.020 0.137 C/EBP [39]
V.CEBP_01 0.029 0.143 C/EBP [39]
V.AP1FJ_Q2 0.027 0.143 AP-1 [66]
V.ETS1_B 0.029 0.143 c-Ets-1 [67]
V.DBP_Q6 0.027 0.143 DBP  
V.FOXM1_01 0.027 0.143 FOXM1 [68]
V.CEBP_Q3 0.028 0.143 C/EBP [39]
V.HELIOSA_02 0.024 0.143 HELIOS  
V.PIT1_Q6 0.030 0.144 Pit-1  
V.AP1_01 0.033 0.146 AP-1 [66]
V.BARBIE_01 0.035 0.150 Barbie box  
V.STAT6_01 0.035 0.150 STAT6 [38]
V.AP1_Q2 0.036 0.151 AP-1 [66]
  1. Transcription factors for which common TFBS associations are found in the promoters of up-regulated p53 target genes are indicated in bold. Results are sorted by Q-value.