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Table 8 A matrix showing estimated fractions of subcellular proteomes on the human proteome

From: ngLOC: an n-gram-based Bayesian method for estimating the subcellular proteomes of eukaryotes

Location

CYT

CSK

END

EXC

GOL

LYS

MIT

NUC

PLA

POX

CYT

14.14a

         

CSK

0.64

1.48a

0.01

       

END

0.10

 

3.04a

       

EXC

0.22

0.01

0.04

11.71a

      

GOL

0.29

0.03

0.31

0.17

1.56a

     

LYS

0.02

  

0.03

< 0.01

0.67a

    

MIT

0.31

 

0.07

0.02

< 0.01

 

4.80a

   

NUC

4.74

0.07

0.09

0.12

0.01

 

0.09

28.38a

  

PLA

0.77

0.02

0.14

0.94

0.09

0.00

0.03

0.19

24.08a

 

POX

0.05

  

< 0.01

  

0.03

  

0.46a

  1. This chart shows the percentages of the proteome estimated to localize over 10 different organelles. aThese cells represent the percentage of sequences predicted to single-localize; all other cells represent multi-localized sequences. The values are based on a CSthresh of 15 and MLCSthresh of 60. CSK, cytoskeleton; CYT, cytoplasm; END, endoplasmic reticulum; EXC, extracellular; GOL, golgi; LYS, lysosome; MIT, mitochondria; NUC, nucleus; PLA, plasma membrane; POX, perixosome.