|
Linkage group
|
Number of markers
|
Genetic length (cM)
|
Recombinant
|
Density of markers
|
Physical map
|
Recombination rate (cM/Mb)
|
Interference: gamma shape parameter
|
|---|
| | |
Haldane function
|
Kosambi function
|
B map
|
V map
| |
Number of scaffolds
|
Assembled length (bp)
| | |
|---|
|
LG01
|
273
|
600.6
|
575.9
|
553.3
|
543.2
|
2.11
|
83
|
25,834,090
|
22.29
|
3.49
|
|
LG02
|
143
|
335.6
|
321.9
|
296.7
|
305.3
|
2.25
|
43
|
13,972,177
|
23.04
|
2.61
|
|
LG03
|
137
|
288.6
|
276.9
|
260.9
|
265.3
|
2.02
|
39
|
11,721,520
|
23.62
|
2.76
|
|
LG04
|
115
|
302.1
|
290.9
|
272.8
|
260.0
|
2.53
|
27
|
10,956,690
|
26.55
|
2.47
|
|
LG05
|
121
|
278.9
|
265.3
|
252.2
|
253.7
|
2.19
|
33
|
12,900,692
|
20.56
|
3.37
|
|
LG06
|
139
|
318.7
|
305.7
|
316.3
|
266.3
|
2.20
|
55
|
15,039,083
|
20.33
|
3.18
|
|
LG07
|
117
|
246.4
|
237.9
|
239.1
|
205.3
|
2.03
|
47
|
10,548,973
|
22.55
|
2.42
|
|
LG08
|
112
|
233.1
|
224.3
|
239.1
|
189.5
|
2.00
|
47
|
10,889,223
|
20.60
|
3.18
|
|
LG09
|
105
|
229.8
|
220.3
|
202.2
|
202.1
|
2.10
|
26
|
9,832,907
|
22.40
|
2.26
|
|
LG10
|
124
|
241.4
|
232.5
|
218.5
|
226.3
|
1.88
|
45
|
10,442,577
|
22.26
|
3.14
|
|
LG11
|
125
|
233.9
|
223.4
|
222.8
|
208.4
|
1.79
|
42
|
12,471,977
|
17.91
|
2.50
|
|
LG12
|
100
|
228.2
|
219.3
|
203.3
|
220.0
|
2.19
|
30
|
9,859,010
|
22.24
|
2.72
|
|
LG13
|
95
|
206.6
|
197.7
|
175.0
|
192.6
|
2.08
|
21
|
9,266,737
|
21.33
|
2.54
|
|
LG14
|
107
|
208.1
|
200.5
|
200
|
186.3
|
1.87
|
25
|
8,776,661
|
22.84
|
3.38
|
|
LG15
|
112
|
194.3
|
184.0
|
180.4
|
177.9
|
1.64
|
42
|
8,109,687
|
22.69
|
1.88
|
|
LG16
|
83
|
143.7
|
138.0
|
143.5
|
125.3
|
1.66
|
21
|
6,072,872
|
22.72
|
2.23
|
|
Total
|
2,008
|
4,290.0
|
4,114.5
|
3,976.1
|
3,827.4
|
2.05
|
626
|
186,694,876
|
22.04
|
2.70
|
- For each linkage group and the whole genome (total) are indicated: the number of markers mapped (1,346 for family B alone, 128 for family V alone, 534 for both); the genetic length of the map: Haldane and Kosambi functions of distance calculated on the combined map (B + V) (the Kosambi function is used for the calculation of the ratios in the other columns); and the number of recombinations for families B and V normalized by progeny numbers; the density of markers (calculation including null distances) - the density is homogeneous for all chromosomes except 15 and 16 which were further worked for superscaffolding assistance (see text), all distances are smaller than 10 cM; the number of scaffolds that were integrated in assembly version 4.0 with AmelMap3 as the framework; the physical length of the scaffolds in assembly 4.0; the recombination rate as a ratio of the genetic length in centimorgans (cM) over the physical length in megabases (Mb). interference: shape parameter of the fitted gamma(ν, 2ν) distribution.
