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Table 1 Some of the major transcripts from clustering analysis of the microarray data

From: Gene expression patterns during adaptation of a helminth parasite to different environmental niches

Transcript

Description

Cluster 1: highly enriched in sporocysts

 

   TC16551

Similar to 90 kDa heat shock protein

   TC13362

Homologue to 40S ribosomal protein S14

   TC16641

Homologue to elongation factor 1-alpha

   TC13505

Homologue to AUT1

   TC10547

Homologue to ribosomal protein S8

   TC17388

Similar to ribosomal protein S15a

   TC7475

Similar to 60S ribosomal protein L8

   TC11590

Ubiquitin/ribosomal fusion protein

   TC7403

Similar to 60S ribosomal protein L30

   TC9217

Weakly similar to cathepsin L-like cysteine proteinase

   TC17720

Similar to putative high mobility group-like nuclear protein 2

   TC11170

Similar to Usmg5 protein

Cluster 2: highly enriched in sporocysts and enriched in adults

 

   TC10486

Glutathione S-transferase 28 kDa (SM28 antigen)

   TC11169

Similar to Usmg5 protein

   TC13573

23 kDa integral membrane protein (SM23)

   TC7377

Similar to Y-box binding protein

   TC16738

14-3-3 protein homolog 1

   TC6863

Homologue to 14-3-3 protein homolog 1

   TC8189

Similar to dynein 8 kDa light chain flagellar outer arm

   TC13511

Homologue to AUT1

   TC13698

40S rRNA protein homolog

   TC16537

Heat shock 70 kDa homolog protein (HSP70) (major surface antigen

   TC10528

Probable dynein light chain (T-cell-stimulating antigen SM10)

   TC11430

Thioredoxin

   TC10691

Thioredoxin peroxidase

   TC16806

Similar to NADH dehydrogenase 6

   TC7615

Similar to ATP synthase lipid-binding protein-like protein

   TC11552

Homologue to cytochrome b

Cluster 3: highly enriched in sporocysts and enriched in cercariae

 

   TC13775

Antigen SM21.7

   TC13518

Homologue to NADH dehydrogenase subunit

   TC17477

Homologue to NADH dehydrogenase subunit 2

   TC17193

Similar to NADH dehydrogenase subunit 4

   TC13722

Homologue to NADH dehydrogenase subunit 5

   TC16807

Homologue to NADH dehydrogenase 6

   TC7310

Homologue to cytochrome c oxidase subunit 1

   TC14303

Homologue to ATPase subunit 6

   TC16782

Enolase

   TC16557

Myosin heavy chain - fluke

   TC10480

Elastase

   TC8910

Tubulin beta-2 chain.

   TC17016

Stathmin-like protein

   TC7850

Similar to actin-filament fragmenting protein

   TC7158

Similar to fibrillarin

Cluster 4: highly enriched in sporocysts and cercariae

 

   TC13565

Myosin light chain

   TC16878

Similar to glycerol-3-phosphate dehydrogenase [NAD+] cytoplasmic

   TC17004

Homologue to cytochrome c

   TC16870

ATP:guanidino kinase SMC74 (EC 2.7.3.-; ATP:guanidino phosphotransferase)

   TC17192

Homologue to NADH dehydrogenase subunit 4

Cluster 5: enriched in sporocysts and highly enriched in adults

 

   TC16575

Major egg antigen

   TC8654

Similar to anti-Mullerian hormone type II receptor precursor

   TC13882

Similar to 26S proteasome regulatory subunit

Cluster 6: highly enriched in adults

 

   TC10493

Cathepsin B1 isotype 1

   TC13457

Eggshell protein precursor

   TC13487

Homologue to eggshell protein precursor

   TC13492

Homologue to eggshell precursor protein

   TC8804

Weakly similar to retinoid X receptor RXR-2

   TC12198

Similar to mucin-like protein

   TC7011

Similar to putative retroelement

   TC16781

Extracellular superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1; EC-SOD)

   TC10637

Weakly similar to aquaporin 9 (small solute channel 1)

   TC9163

Similar to serine/threonine-protein kinase unc-51 (EC 2.7.1.-; (uncoordinated protein 5)

   TC7005

Similar to putative senescence-associated protein

  1. Transcripts enriched in specific schistosome stages are organized into six major clusters. For an updated list of the latest version of TC sequences see Additional data file 8.