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Table 2 Contingency table for experiment A and experiment B, given a threshold q

From: Statistical tools for synthesizing lists of differentially expressed features in related experiments

  

Experiment B

 
  

DE

Non DE

 

Experiment A

DE

O11(q)

O1+(q) - O11(q)

O1+(q)

 

Non DE

O+1(q) - O11(q)

n - O1+(q) - O+1(q) + O11(q)

n - O1+(q)

  

O+1(q)

n - O+1(q)

n

  1. n is the total number of genes and O11(q) is the number of genes in common. DE, differentially expressed. Non DE, non differentially expressed
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Genome Biology

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