Table 2 The most over-represented level 3 GO annotations in the Biological process and Molecular function categories for diurnally regulated genes, using all genes on the Mouse430_2 array as the background distribution
Level 3 GO annotation | Count | P value | FDR (%) |
|---|---|---|---|
Biological process | Â | Â | Â |
Macromolecule metabolism | 776 | 1.6e-9 | 0 |
Primary metabolism | 1,190 | 4.4e-8 | 0 |
Cellular metabolism | 1,217 | 4.6e-6 | 0 |
Response to unfolded protein | 24 | 9.4e-5 | 0.1 |
Protein localization | 155 | 2.6e-4 | 0.3 |
Cell organization and biogenesis | 343 | 5.6e-4 | 0.7 |
Cellular localization | 140 | 5.0e-3 | 6.5 |
Response to heat | 10 | 1.3e-2 | 15.8 |
Molecular function | Â | Â | Â |
Purine nucleotide binding | 343 | 9.3e-7 | 0 |
Transferase activity, transferring phosphorus-containing groups | 232 | 2.9e-6 | 0 |
RNA binding | 120 | 8.7e-6 | 0 |
Ligase activity, forming carbon-nitrogen bonds | 74 | 4.4e-5 | 0.1 |
Unfolded protein binding | 39 | 1.1e-3 | 1.5 |
GTPase activator activity | 34 | 1.2e-2 | 15.2 |
Protein kinase regulator activity | 20 | 1.4e-2 | 17.2 |
Heat shock protein binding | 16 | 1.5e-2 | 18.1 |