Table 4 Location of breakpoints in the MCF7 genome in regions sampled by clones on chromosomes 1, 3, 17 and 20
From: A BAC clone fingerprinting approach to the detection of human genome rearrangements
ID | Chromosome | Position | Uncertainty | Clones |
|---|---|---|---|---|
1L | 1 | 106446622 | Â | M0035E03 |
2L | 1 | 107325668 | 0 | M0090F09 M0095D18 |
3R | 1 | 107642673 | 1,640 | M0012O05 M0064A13 M0089C03 M0090K07 M0126M04 M0152M23 |
4L | 1 | 112083301 | 957 | M0035A16 M0039B19 M0041G20 M0043K05 M0062P11 M0078P07 M0080G18 M0086B04 M0086C02 M0090F09 M0091L21 M0168M09 |
5R | 1 | 112119925 | 0 | M0090F09 M0095D18 |
6R | 3 | 62612471 | 856 | M0012A19 M0041A24 |
7L | 3 | 63679826 | 757 | M0005P04 M0007J14 M0030P20 M0043O24 M0093C20 M0134N23 M0143D18 M0150I03 M0156K22 |
8R | 3 | 63716623 | 1,755 | M0005P04 M0007J14 M0030P20 M0043O24 M0093C20 M0107G11 M0134N23 M0137G17 M0143D18 M0150I03 M0151M05 M0156K22 |
9R | 3 | 63908884 | Â | M0035E03 |
10L | 3 | 63954937 | 8,740 | M0007J14 M0030P20 M0037J18 M0043O24 M0066M03 M0067H12 M0073I23 M0093C20 M0107G11 M0124I19 M0134N23 M0137G17 M0143D18 M0150I03 M0151M05 M0156K22 |
11R | 3 | 63995878 | 0 | M0066M03 M0067H12 M0124I19 M0137G17 |
12L | 3 | 63997257 | 1,178 | M0003F05 M0031O08 M0039A05 M0088O13 M0145B06 |
13R | 3 | 64074753 | 3,228 | M0014E11 M0031O08 M0088O13 M0144L06 M0145B06 |
14L | 3 | 64660949 | 0 | M0012A19 M0041A24 |
15R | 3 | 64927120 | 304 | M0006B19 M0014P03 |
16L | 17 | 54050256 | 11,312 | M0037J18 M0066C22 |
17R | 17 | 54158022 | 0 | M0037J18 M0073I23 |
18L | 17 | 54397666 | 9,801 | M0035A16 M0039B19 M0041G20 M0043K05 M0062P11 M0078P07 M0080G18 M0086B04 M0086C02 M0090F09 M0090P15 M0091L21 M0095D18 M0168M09 |
19R | 17 | 54549098 | 6,065 | M0009I10 M0013G05 M0105A20 M0107H09 |
20L | 17 | 55260098 | 5,548 | M0001M18 M0009I10 M0013G05 M0107H09 |
21R | 17 | 55468383 | 15,761 | M0001M18 M0090P15 M0092G06 |
22L | 17 | 56176919 | 163 | M0089C03 M0090K07 M0126M04 M0152M23 |
23R | 17 | 56206584 | 1,204 | M0064A13 M0089C03 M0090K07 M0126M04 M0152M23 |
24R | 17 | 56233933 | 3,684 | M0005P04 M0007J14 M0030P20 M0043O24 M0093C20 M0134N23 M0143D18 M0150I03 |
25L | 17 | 56644007 | 1,148 | M0005I19 M0045E13 M0054A01 M0054C03 M0058D14 M0058K11 M0059J17 M0062L13 M0077L13 M0089F05 M0089I18 M0094M14 M0107O02 M0124A06 M0132D17 M0138H21 M0145N09 M0147K12 M0148L05 M0159O13 M0160H16 M0165D22 |
26L | 17 | 56961440 | Â | M0021C24 |
27R | 17 | 57339860 | 1,364 | M0024G06 M0123G10 M0155O05 M0156I16 |
28L | 17 | 59745950 | 6,571 | M0006B19 M0014P03 |
29R | 17 | 59781552 | 688 | M0006B19 M0014P03 |
30L | 20 | 38948829 | Â | M0011K13 |
31L | 20 | 40249289 | 2,622 | M0003F05 M0031O08 M0039A05 M0043G01 M0145B06 |
32R | 20 | 40271873 | 1,207 | M0003F05 M0031O08 M0039A05 M0043G01 M0088O13 M0145B06 |
33R | 20 | 40664609 | Â | M0011K13 |
34L | 20 | 45230184 | 278 | M0001A11 M0010D13 M0026L11 M0028H13 M0031E14 M0038G05 M0038P15 M0041B14 M0055I11 M0080H12 M0108H05 M0129A15 M0135D20 M0151F12 M0162M24 M0167J20 |
35L | 20 | 45736731 | Â | M0021C24 |
36L | 20 | 45847023 | 1,846 | M0014E11 M0088O13 M0144L06 |
37L | 20 | 46174956 | Â | M0159C23 |
38L | 20 | 48694494 | 933 | M0001A11 M0055I11 M0151F12 |
39L | 20 | 48729868 | 6,077 | M0010D13 M0026L11 M0028H13 M0031E14 M0038G05 M0038P15 M0041B14 M0080H12 M0108H05 M0129A15 M0135D20 M0162M24 M0165D22 M0167J20 |
40R | 20 | 48863824 | 720 | M0001A11 M0005I19 M0045E13 M0054A01 M0054C03 M0058D14 M0058K11 M0059J17 M0062L13 M0069H04 M0077L13 M0089F05 M0089I18 M0094M14 M0107O02 M0124A06 M0132D17 M0138H21 M0145N09 M0147K12 M0148L05 M0159O13 M0160H16 M0165D22 |
41L | 20 | 51618225 | 4,895 | M0003F05 M0005H09 M0008J22 M0029C09 M0031O08 M0036L24 M0043G01 M0071O17 M0075M20 M0077H17 M0090K04 M0100O14 M0116C01 M0132B21 M0145O12 M0159P14 |
42R | 20 | 52046458 | 2,367 | M0066M03 M0067H12 M0124I19 M0137G17 |
43R | 20 | 52066649 | 126 | M0012O05 M0089C03 M0152M23 |
44R | 20 | 52248474 | Â | M0066C22 |
45R | 20 | 52985221 | Â | M0014P03 |
46R | 20 | 53545530 | 0 | M0036B13 M0141F19 |
47L | 20 | 55122587 | 853 | M0024G06 M0123G10 M0155O05 M0156I16 |
48L | 20 | 55254895 | 3,310 | M0003F05 M0031O08 M0036L24 M0039A05 M0043G01 M0071O17 M0132B21 M0145B06 M0159C23 |
49R | 20 | 55287488 | 1,269 | M0003F05 M0005H09 M0008J22 M0029C09 M0031O08 M0036L24 M0039A05 M0043G01 M0071O17 M0075M20 M0077H17 M0090K04 M0100O14 M0116C01 M0132B21 M0145B06 M0145O12 M0159C23 M0159P14 |
50L | 20 | 59150999 | 936 | M0036B13 M0141F19 |
51R | 20 | 59176749 | 0 | M0036B13 M0141F19 |