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Table 4 The number of conserved and absent/highly divergent CDSs in Xcc strains

From: Comparative and functional genomics reveals genetic diversity and determinants of host specificity among reference strains and a large collection of Chinese isolates of the phytopathogen Xanthomonas campestris pv. campestris

Xcc strains

CDSs annotated

CDSs on chip

Conserved CDSs

AHD CDSs*

Invalid

8004

4,273

4,186

  

6

CN01

  

3,905

270

11

CN02

  

3,821

361

4

CN03

  

3,888

294

4

CN04

  

3,806

376

4

CN05

  

3,921

261

4

CN06

  

3,771

374

41

CN07

  

4,045

137

4

CN08

  

3,870

310

6

CN09

  

3,930

252

4

CN10

  

3,937

245

4

CN11

  

3,916

265

5

CN12

  

3,846

335

5

CN14

  

3,706

475

5

CN15

  

3,812

370

4

CN16

  

3,809

373

4

CN17

  

3,774

406

6

CN18

  

3,809

372

5

CN20

  

3,914

268

4

  1. *Altogether, 730 CDSs were AHD among the Chinese strains, of which 58 were commonly AHD in all the Chinese strains. Fifty-one CDSs were found to be given invalid results.
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Genome Biology

ISSN: 1474-760X

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