Skip to main content

Table 6 H. glycines probesets homologous to C. elegans genes that are involved in dauer metabolism

From: Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines

H. glycines probeset EST Contig length E-value* Identity (%) C. elegans gene Descriptor C. elegans gene InfJ2/egg InfJ2/parJ2 InfJ2/female
Phosphofructokinase          
   HgAffx.14924.1.S1_at 6 670 2.4e-77 72.1 Y110A7A.6a Phosphofructokinase Up Up  
Citrate cycle          
   HgAffx.18932.1.S1_at 7 882 1.4e-113 76.8 T05H10.6a Pyruvate dehydrogenase E1 alpha subunit   Down  
   HgAffx.22652.1.S1_at 16 488 5.8e-73 83.9 T20G5.2 Citrate synthase Up   
   HgAffx.17812.1.S1_at 4 493 8.1e-56 76.1 T20G5.2 Citrate synthase Up   
   HgAffx.6732.1.S1_at 1 631 3.9e-74 71.3 C37E2.1 Isocitrate dehydrogenase Down Up Up
   HgAffx.22639.1.S1_at 6 489 6.6e-45 62.1 C34F6.8 Isocitrate and isopropylmalate dehydrogenases Up Up Up
   HgAffx.15376.1.S1_at 1 435 3.8e-38 75.2 C30F12.7 Isocitrate dehydrogenase    Up
   HgAffx.13764.1.S1_at 1 400 9.2e-30 60.7 C05G5.4 Succinyl-CoA synthetase Up Up Up
   HgAffx.23207.1.A1_at 4 604 3.9e-31 46.4 F25H2.5 Nucleoside diphosphate kinase Up Down Down
   HgAffx.24228.1.S1_at 17 790 1.2e-59 75.4 F25H2.5 Nucleoside diphosphate kinase   Down  
   HgAffx.14699.1.S1_at 4 666 2.5e-82 71 C03G5.1 Succinate dehydrogenase subunit    Up
   HgAffx.23633.1.S1_at 3 624 8.8e-75 77.6 F42A8.2 Succinate dehydrogenase Up   Up
   HgAffx.18264.1.S1_at 1 472 5.2e-50 76.4 C03G5.1 Succinate dehydrogenase subunit    Up
   HgAffx.23633.2.S1_at 1 406 1.7e-33 82 F42A8.2 Succinate dehydrogenase Up   Up
   HgAffx.17082.1.S1_at 1 375 4.4e-31 51.1 T07C4.7 Succinate dehydrogenase cytochrome b chain   Up Up
   HgAffx.2164.1.A1_at 2 738 8.4e-82 76 H14A12.2a Fumarase    
   HgAffx.2164.1.S1_at 2 738 8.4e-82 76 H14A12.2a Fumarase    
   HgAffx.17587.1.S1_at 1 488 4.2e-45 62.7 F20H11.3 Malate dehydrogenase Up   Up
   HgAffx.14431.1.S1_at 3 551 1.0e-57 67.6 F20H11.3 Malate dehydrogenase Up   
Glyoxylate cycle          
   HgAffx.22652.1.S1_at 16 488 5.8e-73 83.9 T20G5.2 Citrate synthase Up   
   HgAffx.17812.1.S1_at 4 493 8.1e-56 76.1 T20G5.2 Citrate synthase Up   
   HgAffx.21758.1.S1_at 2 402 2.9e-37 77.7 C05E4.9a Isocitrate lyase    
   HgAffx.17587.1.S1_at 1 488 4.2e-45 62.7 F20H11.3 Malate dehydrogenase Up   Up
   HgAffx.14431.1.S1_at 3 551 1.0e-57 67.6 F20H11.3 Malate dehydrogenase Up   
SMA and DAF proteins          
   HgAffx.22024.1.S1_at 5 772 1.6e-78 74.2 ZK370.2 SMA-2    
   HgAffx.17831.1.S1_at 1 423 1.1e-41 67.0 R13F6.9 SMA-3    Down
   HgAffx.19781.1.S1_at 1 463 3.7e-49 69.9 R12B2.1 SMA-4 Down Up Up
   HgAffx.16166.1.S1_at 1 475 3.9e-26 50.0 C32D5.2 SMA-6    Down
   HgAffx.10752.1.S1_at 1 651 9.5e-30 44.7 B0240.3 DAF-11    Up
   HgAffx.8385.1.S1_at 1 410 4.5e-21 77.5 R13H8.1a DAF-16    
   HgAffx.21332.1.S1_at 36 2325 9.0e-280 78.6 C47E8.5 DAF-21 (Heatshock protein 90)   Down  
Superoxide dismutase          
   HgAffx.23145.1.S1_at 9 691 1.1e-51 60.7 C15F1.7a Superoxide dismutase 1   Down  
   HgAffx.18049.1.S1_at 3 698 2.2e-38 60.9 ZK430.3 Superoxide dismutase 5 Down Down Down
   HgAffx.7684.1.S1_at 2 538 1.7e-55 67.3 F10D11.1 Superoxide dismutase 2 Down   
   HgAffx.18572.1.S1_at 2 522 6.5e-24 41.6 ZK430.3 Superoxide dismutase 5    Down
Catalase          
   HgAffx.18847.1.S1_at 1 485 6.4e-67 81.9 Y54G11A.5 Catalase 2 Up   Down
   HgAffx.9380.1.S1_at 2 756 1.2e-57 64.6 Y54G11A.13 Catalase 3 Down   
  1. *Threshold 1e-20. Differential expression (FDR 5%) where indicated and expression level of probeset in infective J2 relative to other stage.