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Table 6 H. glycines probesets homologous to C. elegans genes that are involved in dauer metabolism

From: Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines

H. glycines probeset

EST

Contig length

E-value*

Identity (%)

C. elegans gene

Descriptor C. elegans gene

InfJ2/egg†

InfJ2/parJ2†

InfJ2/female†

Phosphofructokinase

         

   HgAffx.14924.1.S1_at

6

670

2.4e-77

72.1

Y110A7A.6a

Phosphofructokinase

Up

Up

 

Citrate cycle

         

   HgAffx.18932.1.S1_at

7

882

1.4e-113

76.8

T05H10.6a

Pyruvate dehydrogenase E1 alpha subunit

 

Down

 

   HgAffx.22652.1.S1_at

16

488

5.8e-73

83.9

T20G5.2

Citrate synthase

Up

  

   HgAffx.17812.1.S1_at

4

493

8.1e-56

76.1

T20G5.2

Citrate synthase

Up

  

   HgAffx.6732.1.S1_at

1

631

3.9e-74

71.3

C37E2.1

Isocitrate dehydrogenase

Down

Up

Up

   HgAffx.22639.1.S1_at

6

489

6.6e-45

62.1

C34F6.8

Isocitrate and isopropylmalate dehydrogenases

Up

Up

Up

   HgAffx.15376.1.S1_at

1

435

3.8e-38

75.2

C30F12.7

Isocitrate dehydrogenase

  

Up

   HgAffx.13764.1.S1_at

1

400

9.2e-30

60.7

C05G5.4

Succinyl-CoA synthetase

Up

Up

Up

   HgAffx.23207.1.A1_at

4

604

3.9e-31

46.4

F25H2.5

Nucleoside diphosphate kinase

Up

Down

Down

   HgAffx.24228.1.S1_at

17

790

1.2e-59

75.4

F25H2.5

Nucleoside diphosphate kinase

 

Down

 

   HgAffx.14699.1.S1_at

4

666

2.5e-82

71

C03G5.1

Succinate dehydrogenase subunit

  

Up

   HgAffx.23633.1.S1_at

3

624

8.8e-75

77.6

F42A8.2

Succinate dehydrogenase

Up

 

Up

   HgAffx.18264.1.S1_at

1

472

5.2e-50

76.4

C03G5.1

Succinate dehydrogenase subunit

  

Up

   HgAffx.23633.2.S1_at

1

406

1.7e-33

82

F42A8.2

Succinate dehydrogenase

Up

 

Up

   HgAffx.17082.1.S1_at

1

375

4.4e-31

51.1

T07C4.7

Succinate dehydrogenase cytochrome b chain

 

Up

Up

   HgAffx.2164.1.A1_at

2

738

8.4e-82

76

H14A12.2a

Fumarase

   

   HgAffx.2164.1.S1_at

2

738

8.4e-82

76

H14A12.2a

Fumarase

   

   HgAffx.17587.1.S1_at

1

488

4.2e-45

62.7

F20H11.3

Malate dehydrogenase

Up

 

Up

   HgAffx.14431.1.S1_at

3

551

1.0e-57

67.6

F20H11.3

Malate dehydrogenase

Up

  

Glyoxylate cycle

         

   HgAffx.22652.1.S1_at

16

488

5.8e-73

83.9

T20G5.2

Citrate synthase

Up

  

   HgAffx.17812.1.S1_at

4

493

8.1e-56

76.1

T20G5.2

Citrate synthase

Up

  

   HgAffx.21758.1.S1_at

2

402

2.9e-37

77.7

C05E4.9a

Isocitrate lyase

   

   HgAffx.17587.1.S1_at

1

488

4.2e-45

62.7

F20H11.3

Malate dehydrogenase

Up

 

Up

   HgAffx.14431.1.S1_at

3

551

1.0e-57

67.6

F20H11.3

Malate dehydrogenase

Up

  

SMA and DAF proteins

         

   HgAffx.22024.1.S1_at

5

772

1.6e-78

74.2

ZK370.2

SMA-2

   

   HgAffx.17831.1.S1_at

1

423

1.1e-41

67.0

R13F6.9

SMA-3

  

Down

   HgAffx.19781.1.S1_at

1

463

3.7e-49

69.9

R12B2.1

SMA-4

Down

Up

Up

   HgAffx.16166.1.S1_at

1

475

3.9e-26

50.0

C32D5.2

SMA-6

  

Down

   HgAffx.10752.1.S1_at

1

651

9.5e-30

44.7

B0240.3

DAF-11

  

Up

   HgAffx.8385.1.S1_at

1

410

4.5e-21

77.5

R13H8.1a

DAF-16

   

   HgAffx.21332.1.S1_at

36

2325

9.0e-280

78.6

C47E8.5

DAF-21 (Heatshock protein 90)

 

Down

 

Superoxide dismutase

         

   HgAffx.23145.1.S1_at

9

691

1.1e-51

60.7

C15F1.7a

Superoxide dismutase 1

 

Down

 

   HgAffx.18049.1.S1_at

3

698

2.2e-38

60.9

ZK430.3

Superoxide dismutase 5

Down

Down

Down

   HgAffx.7684.1.S1_at

2

538

1.7e-55

67.3

F10D11.1

Superoxide dismutase 2

Down

  

   HgAffx.18572.1.S1_at

2

522

6.5e-24

41.6

ZK430.3

Superoxide dismutase 5

  

Down

Catalase

         

   HgAffx.18847.1.S1_at

1

485

6.4e-67

81.9

Y54G11A.5

Catalase 2

Up

 

Down

   HgAffx.9380.1.S1_at

2

756

1.2e-57

64.6

Y54G11A.13

Catalase 3

Down

  
  1. *Threshold 1e-20. †Differential expression (FDR 5%) where indicated and expression level of probeset in infective J2 relative to other stage.