Table 1 Gene classification from ChIP binding data and expression data
From: Clustering of genes into regulons using integrated modeling-COGRIM
TF | B+ | B- | ||
|---|---|---|---|---|
| Â | B+/C- | B+/C+ | B-/C+ | B-/C- |
ACE2 | 46 | 22 | 9 | 5964 |
SWI4 | 25 | 99 | 36 | 5881 |
SWI5 | 54 | 40 | 22 | 5925 |
SWI6 | 54 | 39 | 48 | 5900 |
MBP1 | 48 | 56 | 29 | 5908 |
STB1 | 6 | 17 | 15 | 6003 |
SKN7 | 49 | 46 | 26 | 5920 |
FKH1 | 36 | 26 | 45 | 5934 |
FKH2 | 59 | 46 | 48 | 5888 |
NDD1 | 19 | 74 | 10 | 5938 |
MCM1 | 44 | 42 | 31 | 5924 |
ABF1 | 99 | 175 | 128 | 5639 |
BAS1 | 34 | 8 | 17 | 5982 |
CAD1 | 28 | 10 | 10 | 5993 |
CBF1 | 24 | 19 | 28 | 5970 |
GAL4 | 12 | 28 | 3 | 5998 |
GCN4 | 26 | 53 | 11 | 5951 |
GCR1 | 6 | 6 | 10 | 6019 |
GCR2 | 23 | 8 | 15 | 5995 |
HAP2 | 4 | 14 | 23 | 6000 |
HAP3 | 11 | 11 | 16 | 6003 |
HAP4 | 33 | 34 | 17 | 5957 |
HSF1 | 34 | 18 | 55 | 5934 |
INO2 | 5 | 6 | 14 | 6016 |
LEU3 | 15 | 6 | 22 | 5998 |
MET31 | 21 | 6 | 31 | 5983 |
MSN4 | 24 | 6 | 13 | 5998 |
PDR1 | 22 | 44 | 19 | 5956 |
PHO4 | 36 | 23 | 19 | 5963 |
PUT3 | 3 | 6 | 0 | 6032 |
RAP1 | 113 | 87 | 64 | 5777 |
RCS1 | 16 | 15 | 19 | 5991 |
REB1 | 67 | 72 | 59 | 5843 |
RLM1 | 23 | 14 | 12 | 5992 |
RME1 | 13 | 3 | 15 | 6010 |
ROX1 | 20 | 9 | 20 | 5992 |
SMP1 | 24 | 39 | 16 | 5962 |
STE12 | 33 | 17 | 28 | 5963 |
YAP1 | 27 | 17 | 21 | 5976 |